RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 C16orf72Q14CZ0 275 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 XKR7Q5GH72 579 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 TOR1AIP1Q5JTV8 583 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 WASHC2DQ5SRD0 308 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 GKAP1Q5VSY0 366 aaPredicted RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 ACAD11Q709F0 780 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 RNF44Q7L0R7 432 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 SHISA5Q8N114 240 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 CSNK1A1LQ8N752 337 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 CLHC1Q8NHS4 586 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 CREB3L4Q8TEY5 395 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 OR6C1Q96RD1 312 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 AICDAQ9GZX7 198 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 SPRTNQ9H040 489 aaPredicted RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 OCIAD1Q9NX40 245 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 PCNX2A6NKB5 2137 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 CNOT1A5YKK6 2376 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 PMS2P1A4D2B8 440 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 ZNF860A6NHJ4 632 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 ERI3O43414 337 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 FOXD2O60548 495 aaPredicted RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 NELFEP18615 380 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 RAP1GDS1P52306 607 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 PHEXP78562 749 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 PRSS41Q7RTY9 318 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 SLITRK4Q8IW52 837 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 C1orf52Q8N6N3 182 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 MAGEB10Q96LZ2 347 aaPredicted RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 MS4A8Q9BY19 250 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 ZNF768Q9H5H4 540 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 APMAPQ9HDC9 416 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 VPS29Q9UBQ0 182 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 RUVBL1Q9Y265 456 aaKnown RBP14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 CCL27Q9Y4X3 112 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 AP1M2Q9Y6Q5 423 aa14.69□□□□□ -0.06
PDLIM5-202ENST00000318007 C9JVG2 144 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 FTH1P19P0C7X4 201 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 ZNF888P0CJ79 500 aaPredicted RBP14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 ALOX15P16050 662 aaPredicted RBP14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 IL1RNP18510 177 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 ITIH1P19827 911 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 DIO3P55073 304 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 HYAL2Q12891 473 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 TUBB3Q13509 450 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 RBM44Q6ZP01 1051 aaKnown RBP14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 TRIM46Q7Z4K8 759 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 PRSS42Q7Z5A4 293 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 ARHGAP22Q7Z5H3 698 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 DNAJC22Q8N4W6 341 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 ZNF655Q8N720 491 aaPredicted RBP14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 WDR48Q8TAF3 677 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 NUDT8Q8WV74 236 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 GFM2Q969S9 779 aaKnown RBP14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 SEC16BQ96JE7 1060 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 RHBGQ9H310 441 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 LRTM1Q9HBL6 345 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 FGF21Q9NSA1 209 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 RIC8BQ9NVN3 520 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 HEY2Q9UBP5 337 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 BAIAP2L1Q9UHR4 511 aa14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 CDV3Q9UKY7 258 aaKnown RBP14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 APOBEC2Q9Y235 224 aaKnown RBP14.68□□□□□ -0.06
PDLIM5-202ENST00000318007 ADAMTS20P59510 1910 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 LRIT2A6NDA9 550 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 EFCAB7A8K855 629 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 SLC28A1O00337 649 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 PLPP1O14494 284 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 ALDOCP09972 364 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 CCL4P13236 92 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 CSTF2P33240 577 aaKnown RBP eCLIP14.67□□□□□ -0.062e-6■■□□□ 13.9
PDLIM5-202ENST00000318007 INHBCP55103 352 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 OLR1P78380 273 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 UBAP2LQ14157 1087 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 DEFB134Q4QY38 66 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 ZC3H12BQ5HYM0 836 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 C6orf136Q5SQH8 315 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 HES3Q5TGS1 186 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 KHDRBS2Q5VWX1 349 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 LARP4Q71RC2 724 aaKnown RBP eCLIP14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 PIGWQ7Z7B1 504 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 AMER3Q8N944 861 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 TRPV3Q8NET8 790 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 OR1L3Q8NH93 324 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 NETO1Q8TDF5 533 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 CMTM7Q96FZ5 175 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 ARMCX1Q9P291 453 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 ANKMY1Q9P2S6 941 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 KIF26BQ2KJY2 2108 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 OR2B3O76000 313 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 KLK1P06870 262 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 AHRP35869 848 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 PIK3CBP42338 1070 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 RGS1Q08116 209 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 CSTF3Q12996 717 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 MTDHQ86UE4 582 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 TTLQ8NG68 377 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 OR8K5Q8NH50 307 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 PMEPA1Q969W9 287 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 SLC41A2Q96JW4 573 aa14.67□□□□□ -0.06
PDLIM5-202ENST00000318007 DHCR7Q9UBM7 475 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms