RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 KDELR2P33947 212 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 AFF1P51825 1210 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 C2orf80Q0P641 193 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 MAD2L1BPQ15013 274 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 UGT3A2Q3SY77 523 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TTC23LQ6PF05 361 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 SMARCD3Q6STE5 483 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 B3GLCTQ6Y288 498 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TRMT11Q7Z4G4 463 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TMEM179BQ7Z7N9 219 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 OR4N4Q8N0Y3 316 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 NATD1Q8N6N6 113 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TOP6BLQ8N6T0 577 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 PAPD5Q8NDF8 572 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 DBF4BQ8NFT6 615 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 BEST4Q8NFU0 473 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TMEM40Q8WWA1 233 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 FCGR1BQ92637 280 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 FUBP1Q96AE4 644 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 ELAC1Q9H777 363 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TPT1P8Q9HAU6 139 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 PRDM16Q9HAZ2 1276 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 SLAMF7Q9NQ25 335 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 EQTNQ9NQ60 294 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 MKL2Q9ULH7 1088 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 RWDD3Q9Y3V2 267 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TRPM7Q96QT4 1865 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 SOBPA7XYQ1 873 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 POM121CA8CG34 1229 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 CENPBD1B2RD01 187 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 GABRDO14764 452 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 KCNK2O95069 426 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 STATHP02808 62 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 C7P10643 843 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 SDC2P34741 201 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 RPL35P42766 123 aaKnown RBP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 BNC1Q01954 994 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 USP41Q3LFD5 358 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 CARD16Q5EG05 197 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 ZNF691Q5VV52 312 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 KANK2Q63ZY3 851 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 DHRS4L2Q6PKH6 230 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 GLCCI1Q86VQ1 547 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 CYP4Z2PQ8N1L4 340 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 Q8N402 240 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 IQCF1Q8N6M8 205 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 ZNF433Q8N7K0 673 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 NFKBIDQ8NI38 313 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 C8orf48Q96LL4 319 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 OR5M11Q96RB7 305 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 FAM129BQ96TA1 746 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 YIPF4Q9BSR8 244 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 HDHD5Q9BXW7 423 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 HOXD1Q9GZZ0 328 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 MKRN2Q9H000 416 aaKnown RBP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 SAV1Q9H4B6 383 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 SGK2Q9HBY8 427 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 SEMA3GQ9NS98 782 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 FAM105AQ9NUU6 356 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 PCDHB7Q9Y5E2 793 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 KIAA1217Q5T5P2 1943 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 LCHNA4D1U4 455 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 GABARAPO95166 117 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 CCNDBP1O95273 360 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 RLN1P04808 185 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 CKMP06732 381 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 NOS3P29474 1203 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 MAP2K3P46734 347 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 ARCN1P48444 511 aaKnown RBP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 KCNQ1P51787 676 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 GRSF1Q12849 480 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 EXOC3L2Q2M3D2 409 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 IFI44LQ53G44 452 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 ZMAT1Q5H9K5 638 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 BRMS1LQ5PSV4 323 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 XAF1Q6GPH4 301 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 TUBA3EQ6PEY2 450 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 RANBP10Q6VN20 620 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 LHFPL3Q86UP9 236 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 PIANPQ8IYJ0 282 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 FAM9CQ8IZT9 166 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 PIAS4Q8N2W9 510 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 CELF5Q8N6W0 485 aaKnown RBP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 DNAJC5GQ8N7S2 189 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 ATP6V1C2Q8NEY4 427 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 COL26A1Q96A83 441 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 ZNF583Q96ND8 569 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 DUSP26Q9BV47 211 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 MRPL9Q9BYD2 267 aaKnown RBP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 GSDMCQ9BYG8 508 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 POLR2J3Q9H1A7 115 aaKnown RBP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 IKZF5Q9H5V7 419 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 NUDT4Q9NZJ9 180 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 PCTPQ9UKL6 214 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 CMAHPQ9Y471 501 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 PRRG1O14668 218 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 MID1O15344 667 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 HOXC11O43248 304 aaPredicted RBP7.28□□□□□ -1.24
CDHR3-201ENST00000317716 LDB2O43679 373 aa7.28□□□□□ -1.24
CDHR3-201ENST00000317716 SLC28A2O43868 658 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms