RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ZNF26P17031 533 aaPredicted RBP6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 HOXB9P17482 250 aaPredicted RBP6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 TYRP1P17643 537 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 POLR2CP19387 275 aaPredicted RBP6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 PRKACGP22612 351 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 LSSP48449 732 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 CRYBA2P53672 197 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 TDGQ13569 410 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 LRIT3Q3SXY7 679 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 OTUD3Q5T2D3 398 aaPredicted RBP6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 ZCCHC8Q6NZY4 707 aaKnown RBP6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 AAGABQ6PD74 315 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 WDR53Q7Z5U6 358 aaPredicted RBP6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 TICAM1Q8IUC6 712 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 ZNF687Q8N1G0 1237 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 ITCHQ96J02 903 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 OR2M4Q96R27 311 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 RSPO3Q9BXY4 272 aaPredicted RBP6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 PFDN4Q9NQP4 134 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 SPASTQ9UBP0 616 aa6.7□□□□□ -1.34
LYSMD3-201ENST00000315948 OR2W5A6NFC9 320 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 ZNF860A6NHJ4 632 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 ISM1B1AKI9 464 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 PRKD3O94806 890 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 WNT1P04628 370 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 MAGP20916 626 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 HNRNPA2B1P22626 353 aaKnown RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 TIA1P31483 386 aaKnown RBP eCLIP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 SRP54P61011 504 aaKnown RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 OLR1P78380 273 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 FOLH1Q04609 750 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 DUSP2Q05923 314 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 SMAD4Q13485 552 aaKnown RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 GPR18Q14330 331 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 ADRM1Q16186 407 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 DEFB110Q30KQ9 67 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 LRRC23Q53EV4 343 aaPredicted RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 RUNDC3AQ59EK9 446 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 TTC23LQ6PF05 361 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 PRSS41Q7RTY9 318 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 CBR4Q8N4T8 237 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 OR8K5Q8NH50 307 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 MAGED4Q96JG8 741 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 CCT7Q99832 543 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 SLC6A16Q9GZN6 736 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 FSCN3Q9NQT6 498 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 ITM2CQ9NQX7 267 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 EVA1BQ9NVM1 165 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 NCKAP1Q9Y2A7 1128 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 SCAMP2O15127 329 aaKnown RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 IL6P05231 212 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 GZMMP51124 257 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 DGKEP52429 567 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 PRKCQQ04759 706 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 C2orf80Q0P641 193 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 NFATC4Q14934 902 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 SMAD2Q15796 467 aaKnown RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 PRRT3Q5FWE3 981 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 UNC5DQ6UXZ4 953 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 TMEM179BQ7Z7N9 219 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 LAS2Q8IYD9 372 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 NAGSQ8N159 534 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 C16orf78Q8WTQ4 265 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 HLA-CQ95604 372 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 CPPED1Q9BRF8 314 aaPredicted RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 ORAI3Q9BRQ5 295 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 DUSP26Q9BV47 211 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 CHID1Q9BWS9 393 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 TRIM4Q9C037 500 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 CD320Q9NPF0 282 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 ACTR3BQ9P1U1 418 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 SNX8Q9Y5X2 465 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 CCDC88CQ9P219 2028 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 PCDH15Q96QU1 1955 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 DLGAP1O14490 977 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 NDUFS4O43181 175 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 PI15O43692 258 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 B4GALT2O60909 372 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 CTSVO60911 334 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 ETFAP13804 333 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 FOSL2P15408 326 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 RAB28P51157 221 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 GTF2A1P52655 376 aaPredicted RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 MRPS21P82921 87 aaKnown RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 EIF2B5Q13144 721 aaKnown RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 PLCL1Q15111 1095 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 LCN9Q8WX39 176 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 EXOSC8Q96B26 276 aaKnown RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 ARSGQ96EG1 525 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 NECAB3Q96P71 396 aaPredicted RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 AASDHPPTQ9NRN7 309 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 TAAR2Q9P1P5 351 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 ADGRE2Q9UHX3 823 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 MRPS2Q9Y399 296 aaKnown RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 MAP4K5Q9Y4K4 846 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 SPENQ96T58 3664 aaKnown RBP6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 NINQ8N4C6 2090 aa6.69□□□□□ -1.34
LYSMD3-201ENST00000315948 LOC105369274A0A096LPK9 316 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms