RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TSPAN17Q96FV3 270 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 IMMP1LQ96LU5 166 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 ATOH8Q96SQ7 321 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 ZNF160Q9HCG1 818 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 HCN3Q9P1Z3 774 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 PTBP2Q9UKA9 531 aaKnown RBP13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 NAALAD2Q9Y3Q0 740 aa13.8□□□□□ -0.2
PPP1CA-201ENST00000312989 MDC1Q14676 2089 aaKnown RBP13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 NBASA2RRP1 2371 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 ZNF860A6NHJ4 632 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 NCF1BA6NI72 391 aaPredicted RBP13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 NCF1CA8MVU1 366 aaPredicted RBP13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 SLC35G6P0C7Q6 338 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 MTHFD2P13995 350 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 NCF1P14598 390 aaPredicted RBP13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 ITGA3P26006 1051 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 SPRP35270 261 aaPredicted RBP13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 XCR1P46094 333 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 AVPR1BP47901 424 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 UQCRFS1P47985 274 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 EEF1A2Q05639 463 aaKnown RBP13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 CSHL1Q14406 222 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 CDKL4Q5MAI5 379 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 FAAH2Q6GMR7 532 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 ADNP2Q6IQ32 1131 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 LANCL3Q6ZV70 420 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 CUZD1Q86UP6 607 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 OR51Q1Q8NH59 317 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 UTP15Q8TED0 518 aaKnown RBP13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 BARD1Q99728 777 aaKnown RBP13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 EGFL8Q99944 293 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 LHPPQ9H008 270 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 ZNF700Q9H0M5 742 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 KLHL31Q9H511 634 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 ACSS3Q9H6R3 686 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 MKL2Q9ULH7 1088 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 KCNE2Q9Y6J6 123 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 ANKRD12Q6UB98 2062 aa13.79□□□□□ -0.2
PPP1CA-201ENST00000312989 MAP2K7O14733 419 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 WDR47O94967 919 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 ALDOAP04075 364 aaKnown RBP13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 CYC1P08574 325 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 PRR35P0CG20 571 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 ALOX12P18054 663 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 GRK3P35626 688 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 SLC12A2P55011 1212 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 IRF9Q00978 393 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 RHAGQ02094 409 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 BMPR2Q13873 1038 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 INPP5JQ15735 1006 aaPredicted RBP13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 NDUFAF7Q7L592 441 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 CPT1CQ8TCG5 803 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 ISL2Q96A47 359 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 WDR34Q96EX3 536 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 GPR78Q96P69 363 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 CDC42EP4Q9H3Q1 356 aaKnown RBP13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 TXNDC16Q9P2K2 825 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 B3GNT3Q9Y2A9 372 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 NTNG1Q9Y2I2 539 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 DYRK1BQ9Y463 629 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 PCDHGA10Q9Y5H3 936 aa13.78□□□□□ -0.2
PPP1CA-201ENST00000312989 IGHV3-20A0A0C4DH32 117 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 IPO13O94829 963 aaKnown RBP13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 HEXBP07686 556 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 ZNF888P0CJ79 500 aaPredicted RBP13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 C1GALT1C1LP0DN25 315 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 MAGEA12P43365 314 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 HSPA7P48741 367 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 OLR1P78380 273 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 CDC16Q13042 620 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 SLBPQ14493 270 aaKnown RBP eCLIP13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 SLMAPQ14BN4 828 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 DEFB134Q4QY38 66 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 FRA10AC1Q70Z53 315 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 GPSM1Q86YR5 675 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 PPP4R1Q8TF05 950 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 ZNF592Q92610 1267 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 C19orf60Q96EN9 201 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 THOC3Q96J01 351 aaKnown RBP13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 CYTH2Q99418 400 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 AIF1LQ9BQI0 150 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 RBCK1Q9BYM8 510 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 ALG9Q9H6U8 611 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 ANKHQ9HCJ1 492 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 GPRC5BQ9NZH0 403 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 ZNF490Q9ULM2 529 aaPredicted RBP13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 CLDN16Q9Y5I7 305 aa13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 USP9XQ93008 2570 aaPredicted RBP13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 PRRC2CQ9Y520 2896 aaKnown RBP13.77□□□□□ -0.21
PPP1CA-201ENST00000312989 NSG1A0A0A6YYJ2 146 aa13.76□□□□□ -0.21
PPP1CA-201ENST00000312989 PABPN1LA6NDY0 278 aaKnown RBP13.76□□□□□ -0.21
PPP1CA-201ENST00000312989 TTLL8A6PVC2 850 aa13.76□□□□□ -0.21
PPP1CA-201ENST00000312989 PCDH17O14917 1159 aa13.76□□□□□ -0.21
PPP1CA-201ENST00000312989 ALPPP05187 535 aa13.76□□□□□ -0.21
PPP1CA-201ENST00000312989 SERPINA7P05543 415 aa13.76□□□□□ -0.21
PPP1CA-201ENST00000312989 C2P06681 752 aa13.76□□□□□ -0.21
PPP1CA-201ENST00000312989 SERPINA6P08185 405 aa13.76□□□□□ -0.21
PPP1CA-201ENST00000312989 C8orf89P0DMQ9 161 aa13.76□□□□□ -0.21
PPP1CA-201ENST00000312989 GNAZP19086 355 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms