RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 ABHD17BQ5VST6 288 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 CPEB2Q7Z5Q1 589 aaKnown RBP7.7□□□□□ -1.18
TPM3-203ENST00000312970 C17orf64Q86WR6 236 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 SPNS2Q8IVW8 549 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 ZC3H7AQ8IWR0 971 aaKnown RBP7.7□□□□□ -1.18
TPM3-203ENST00000312970 AGGF1Q8N302 714 aaeCLIP7.7□□□□□ -1.181e-7■□□□□ 11.2
TPM3-203ENST00000312970 CAMKVQ8NCB2 501 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 C2CD4AQ8NCU7 369 aaPredicted RBP7.7□□□□□ -1.18
TPM3-203ENST00000312970 OR51Q1Q8NH59 317 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 RELTQ969Z4 430 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 HIST1H2AHQ96KK5 128 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 TAAR6Q96RI8 345 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 HIST1H2AJQ99878 128 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 MACROD1Q9BQ69 325 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 H2AFJQ9BTM1 129 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 RSRP1Q9BUV0 290 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 VN1R1Q9GZP7 353 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 RNF32Q9H0A6 362 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 ATG10Q9H0Y0 220 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 TAS2R13Q9NYV9 303 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 C19orf25Q9UFG5 118 aaPredicted RBP7.7□□□□□ -1.18
TPM3-203ENST00000312970 TRMT6Q9UJA5 497 aaKnown RBP7.7□□□□□ -1.18
TPM3-203ENST00000312970 PDE10AQ9Y233 779 aa7.7□□□□□ -1.18
TPM3-203ENST00000312970 MAP1AP78559 2803 aaPredicted RBP7.7□□□□□ -1.18
TPM3-203ENST00000312970 GOLGA6L10A0A0M3HER8 536 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 SERTM1A2A2V5 107 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 OR5H15A6NDH6 313 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 A8MUI8 341 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 LCMT2O60294 686 aaKnown RBP7.69□□□□□ -1.18
TPM3-203ENST00000312970 ZG16O60844 167 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 RASAL1O95294 804 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 TTC4O95801 387 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 F10P00742 488 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 AHSGP02765 367 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 STATHP02808 62 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 HOXB1P14653 301 aaPredicted RBP7.69□□□□□ -1.18
TPM3-203ENST00000312970 NPPBP16860 134 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 PGAM1P18669 254 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 IL10P22301 178 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 BCL6P41182 706 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 XCR1P46094 333 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 FNTAP49354 379 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 AGTR2P50052 363 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 TDGF1P3P51864 188 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 EFNA3P52797 238 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 IL2P60568 153 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 TBPL1P62380 186 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 SNRPNP63162 240 aaKnown RBP7.69□□□□□ -1.18
TPM3-203ENST00000312970 SP140Q13342 867 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 NAE1Q13564 534 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 PPP1R7Q15435 360 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 BTBD16Q32M84 506 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 MINDY4Q4G0A6 757 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 RNASEH2BQ5TBB1 312 aaKnown RBP7.69□□□□□ -1.18
TPM3-203ENST00000312970 MFSD4BQ5TF39 518 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 SP5Q6BEB4 398 aaPredicted RBP7.69□□□□□ -1.18
TPM3-203ENST00000312970 PLAG1Q6DJT9 500 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 CAPN13Q6MZZ7 669 aaPredicted RBP7.69□□□□□ -1.18
TPM3-203ENST00000312970 TMEM214Q6NUQ4 689 aaKnown RBP7.69□□□□□ -1.18
TPM3-203ENST00000312970 HIBCHQ6NVY1 386 aaPredicted RBP7.69□□□□□ -1.18
TPM3-203ENST00000312970 H3F3CQ6NXT2 135 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 AGTRAPQ6RW13 159 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 PAQR3Q6TCH7 311 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 NXPE4Q6UWF7 544 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 LCTLQ6UWM7 567 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 TMEM207Q6UWW9 146 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 GFRALQ6UXV0 394 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 VASH1Q7L8A9 365 aaPredicted RBP7.69□□□□□ -1.18
TPM3-203ENST00000312970 PRSS41Q7RTY9 318 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 VN1R4Q7Z5H5 301 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 PCGF5Q86SE9 256 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 FJX1Q86VR8 437 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 SLC26A11Q86WA9 606 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 TREML1Q86YW5 311 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 ALDH16A1Q8IZ83 802 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 MYO1HQ8N1T3 1032 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 KCT2Q8NC54 265 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 ACTRT1Q8TDG2 376 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 SLC13A3Q8WWT9 602 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 NR4A3Q92570 626 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 ZNF354BQ96LW1 612 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 NDNQ99608 321 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 HAUS8Q9BT25 410 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 NAT9Q9BTE0 207 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 SGPP1Q9BX95 441 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 TRIM54Q9BYV2 358 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 ANKHQ9HCJ1 492 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 ABI3Q9P2A4 366 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 ADAMTS6Q9UKP5 1117 aa7.69□□□□□ -1.18
TPM3-203ENST00000312970 SVILO95425 2214 aa7.68□□□□□ -1.18
TPM3-203ENST00000312970 SCN3AQ9NY46 2000 aa7.68□□□□□ -1.18
TPM3-203ENST00000312970 IGHV3-20A0A0C4DH32 117 aa7.68□□□□□ -1.18
TPM3-203ENST00000312970 FEZF1A0PJY2 475 aa7.68□□□□□ -1.18
TPM3-203ENST00000312970 PABPN1LA6NDY0 278 aaKnown RBP7.68□□□□□ -1.18
TPM3-203ENST00000312970 OR2W5A6NFC9 320 aa7.68□□□□□ -1.18
TPM3-203ENST00000312970 SGK494L7N484 410 aa7.68□□□□□ -1.18
TPM3-203ENST00000312970 PRAMEF2O60811 474 aa7.68□□□□□ -1.18
TPM3-203ENST00000312970 SEC24DO94855 1032 aaPredicted RBP7.68□□□□□ -1.18
TPM3-203ENST00000312970 SLC35G6P0C7Q6 338 aa7.68□□□□□ -1.18
TPM3-203ENST00000312970 CDH1P12830 882 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms