RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ARSFP54793 590 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 UGT8Q16880 541 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 RIPOR1Q6ZS17 1223 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 GOLGA7Q7Z5G4 137 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 SYVN1Q86TM6 617 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 KLHDC8AQ8IYD2 350 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 RHEBL1Q8TAI7 183 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 PROKR1Q8TCW9 393 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 MTFMTQ96DP5 389 aaKnown RBP11.42□□□□□ -0.58
SCFD1-201ENST00000311943 ABHD17AQ96GS6 310 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 PEX11GQ96HA9 241 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 F2RL3Q96RI0 385 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 GPR87Q9BY21 358 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 ZBTB20Q9HC78 741 aaPredicted RBP11.42□□□□□ -0.58
SCFD1-201ENST00000311943 PSMC3IPQ9P2W1 217 aaPredicted RBP11.42□□□□□ -0.58
SCFD1-201ENST00000311943 ZFP69BQ9UJL9 534 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 RNF11Q9Y3C5 154 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 HS3ST3B1Q9Y662 390 aa11.42□□□□□ -0.58
SCFD1-201ENST00000311943 ARHGAP10A1A4S6 786 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 A8MT66 165 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 C9J4A7 227 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 KLHL18O94889 574 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 TGFB1P01137 390 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 HBQ1P09105 142 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 RAB40ALP0C0E4 278 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 FBLP22087 321 aaKnown RBP11.41□□□□□ -0.58
SCFD1-201ENST00000311943 SLC26A3P40879 764 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 DDX39BQ13838 428 aaKnown RBP11.41□□□□□ -0.58
SCFD1-201ENST00000311943 TOR1AIP1Q5JTV8 583 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 TCHHL1Q5QJ38 904 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-201ENST00000311943 ATG9BQ674R7 924 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 WDR93Q6P2C0 686 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 BORAQ6PGQ7 559 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 TMIGD1Q6UXZ0 262 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 LANCL3Q6ZV70 420 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 ZC3H7AQ8IWR0 971 aaKnown RBP11.41□□□□□ -0.58
SCFD1-201ENST00000311943 OR2Y1Q8NGV0 311 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 UTP15Q8TED0 518 aaKnown RBP11.41□□□□□ -0.58
SCFD1-201ENST00000311943 HBEGFQ99075 208 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 ARHGAP9Q9BRR9 750 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 RHBGQ9H310 441 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 NOL11Q9H8H0 719 aaKnown RBP11.41□□□□□ -0.58
SCFD1-201ENST00000311943 SEMA4BQ9NPR2 832 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-201ENST00000311943 ENAMQ9NRM1 1142 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 OPTCQ9UBM4 332 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 GPN3Q9UHW5 284 aaPredicted RBP11.41□□□□□ -0.58
SCFD1-201ENST00000311943 ZNF225Q9UK10 706 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 MAN2B2Q9Y2E5 1009 aa11.41□□□□□ -0.58
SCFD1-201ENST00000311943 VSTM2BA6NLU5 285 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 WASHC1A8K0Z3 465 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 K7EPI3 171 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 DLX3O60479 287 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 ETHE1O95571 254 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 S100BP04271 92 aaPredicted RBP11.4□□□□□ -0.58
SCFD1-201ENST00000311943 FOLR3P41439 243 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 HNRNPFP52597 415 aaKnown RBP11.4□□□□□ -0.58
SCFD1-201ENST00000311943 PLA2G16P53816 162 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 IRF8Q02556 426 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 Q0VFX4 171 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 KIRREL2Q6UWL6 708 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 TIFABQ6ZNK6 161 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 UBE3DQ7Z6J8 389 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 MRGPREQ86SM8 312 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 EIF1ADQ8N9N8 165 aaKnown RBP11.4□□□□□ -0.58
SCFD1-201ENST00000311943 TMEM52Q8NDY8 209 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 SREK1Q8WXA9 508 aaKnown RBP11.4□□□□□ -0.58
SCFD1-201ENST00000311943 UCN3Q969E3 161 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 AIF1LQ9BQI0 150 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 ING2Q9H160 280 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 IPPKQ9H8X2 491 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 PELI2Q9HAT8 420 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 FARSBQ9NSD9 589 aaKnown RBP11.4□□□□□ -0.58
SCFD1-201ENST00000311943 P4HTMQ9NXG6 502 aa11.4□□□□□ -0.58
SCFD1-201ENST00000311943 ERVH48-1M5A8F1 160 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 SOCS6O14544 535 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 ATXN7O15265 892 aaPredicted RBP11.4□□□□□ -0.59
SCFD1-201ENST00000311943 GRK3P35626 688 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 BTG2P78543 158 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 RELAQ04206 551 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 NFATC3Q12968 1075 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 RUNX2Q13950 521 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 CPSF6Q16630 551 aaKnown RBP eCLIP11.4□□□□□ -0.59
SCFD1-201ENST00000311943 FDCSPQ8NFU4 85 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 OR51Q1Q8NH59 317 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 TMEM237Q96Q45 408 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 MTERF1Q99551 399 aaKnown RBP11.4□□□□□ -0.59
SCFD1-201ENST00000311943 SARGQ9BW04 601 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 SLC6A16Q9GZN6 736 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 OR51B5Q9H339 312 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 LUZP4Q9P127 313 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF282Q9UDV7 671 aaPredicted RBP11.4□□□□□ -0.59
SCFD1-201ENST00000311943 PCTPQ9UKL6 214 aa11.4□□□□□ -0.59
SCFD1-201ENST00000311943 IDSB3KWA1 339 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 SPAG7O75391 227 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 BMP10O95393 424 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 ONECUT2O95948 504 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 RECKO95980 971 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 SLC35G6P0C7Q6 338 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 PCNAP12004 261 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 KRT15P19012 456 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms