RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 SPNS1Q9H2V7 528 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 SLC22A7Q9Y694 548 aa18.43■□□□□ 0.54
LIME1-201ENST00000309546 TRAV17A0A0B4J275 112 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 E7ESA3 106 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 FANCGO15287 622 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 PIAS1O75925 651 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 WDPCPO95876 746 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 TAS2R39P59534 338 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 OLR1P78380 273 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 HERC3Q15034 1050 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 PPP1R3AQ16821 1122 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 DEFB134Q4QY38 66 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 ABHD17BQ5VST6 288 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 FRA10AC1Q70Z53 315 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 ANKRD37Q7Z713 158 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 THOC6Q86W42 341 aaKnown RBP18.42■□□□□ 0.54
LIME1-201ENST00000309546 ZGRF1Q86YA3 2104 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 BCORP1Q8N888 145 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 OR4K1Q8NGD4 311 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 PDLIM5Q96HC4 596 aaKnown RBP18.42■□□□□ 0.54
LIME1-201ENST00000309546 PDLIM2Q96JY6 352 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 OLAHQ9NV23 265 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 RNF14Q9UBS8 474 aa18.42■□□□□ 0.54
LIME1-201ENST00000309546 NBPF19A0A087WUL8 3843 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 A8MUI8 341 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 NDC80O14777 642 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 B3GALT4O96024 378 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 LDLRP01130 860 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 CYC1P08574 325 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 ZNF888P0CJ79 500 aaPredicted RBP18.41■□□□□ 0.54
LIME1-201ENST00000309546 EDN3P14138 238 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 AGTR2P50052 363 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 SLC12A2P55011 1212 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 RGS1Q08116 209 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 CALCOCO2Q13137 446 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 PWP1Q13610 501 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 RPUSD3Q6P087 351 aaKnown RBP18.41■□□□□ 0.54
LIME1-201ENST00000309546 BBOF1Q8ND07 529 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 HAS2Q92819 552 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 VPS39Q96JC1 886 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 SARGQ9BW04 601 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 RHOJQ9H4E5 214 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 GPAMQ9HCL2 828 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 NSMCE4AQ9NXX6 385 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 MOCS1Q9NZB8 636 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 TEKT2Q9UIF3 430 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 ZFP69BQ9UJL9 534 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 OSGIN2Q9Y236 505 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 SLC22A14Q9Y267 594 aa18.41■□□□□ 0.54
LIME1-201ENST00000309546 UTP20O75691 2785 aaKnown RBP18.41■□□□□ 0.54
LIME1-201ENST00000309546 GALR3O60755 368 aaPredicted RBP18.4■□□□□ 0.54
LIME1-201ENST00000309546 ALOX12P18054 663 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 HNF4AP41235 474 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 SCTRP47872 440 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 SKP1P63208 163 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 REEP5Q00765 189 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 C2orf54Q08AI8 447 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 ABRAXAS2Q15018 415 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 RBBP5Q15291 538 aaKnown RBP18.4■□□□□ 0.54
LIME1-201ENST00000309546 NSDHLQ15738 373 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 SFT2D3Q587I9 215 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 FCRLBQ6BAA4 426 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 CEP97Q8IW35 865 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 AFAP1L2Q8N4X5 818 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 SUN3Q8TAQ9 357 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 PYROXD1Q8WU10 500 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 ANKRD49Q8WVL7 239 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 TSLPQ969D9 159 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 AIF1LQ9BQI0 150 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 UNKQ9C0B0 810 aaKnown RBP18.4■□□□□ 0.54
LIME1-201ENST00000309546 PELI2Q9HAT8 420 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 SAYSD1Q9NPB0 183 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 SMYD2Q9NRG4 433 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 CTNNAL1Q9UBT7 734 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 OARD1Q9Y530 152 aa18.4■□□□□ 0.54
LIME1-201ENST00000309546 OR5H15A6NDH6 313 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 NCF1BA6NI72 391 aaPredicted RBP18.39■□□□□ 0.53
LIME1-201ENST00000309546 NCF1CA8MVU1 366 aaPredicted RBP18.39■□□□□ 0.53
LIME1-201ENST00000309546 NCF1P14598 390 aaPredicted RBP18.39■□□□□ 0.53
LIME1-201ENST00000309546 SSTR1P30872 391 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 RHAGQ02094 409 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 ACTN3Q08043 901 aaPredicted RBP18.39■□□□□ 0.53
LIME1-201ENST00000309546 TSNQ15631 228 aaKnown RBP18.39■□□□□ 0.53
LIME1-201ENST00000309546 PLAG1Q6DJT9 500 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 PAPD4Q6PIY7 484 aaKnown RBP18.39■□□□□ 0.53
LIME1-201ENST00000309546 ABHD13Q7L211 337 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 ADAMTSL2Q86TH1 951 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 NT5CQ8TCD5 201 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 OR1F2PQ96R84 312 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 TAAR6Q96RI8 345 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 SLX1AQ9BQ83 275 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 RNF32Q9H0A6 362 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 KCNK13Q9HB14 408 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 LANCL2Q9NS86 450 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 STMN3Q9NZ72 180 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 TXNDC16Q9P2K2 825 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 KCNE2Q9Y6J6 123 aa18.39■□□□□ 0.53
LIME1-201ENST00000309546 CTAGE15A4D2H0 777 aa18.38■□□□□ 0.53
LIME1-201ENST00000309546 FAM187AA6NFU0 413 aa18.38■□□□□ 0.53
LIME1-201ENST00000309546 RAD51CO43502 376 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms