RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 RUVBL1Q9Y265 456 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 FREM2Q5SZK8 3169 aa17.06■□□□□ 0.32
SSSCA1-201ENST00000309328 WDFY3Q8IZQ1 3526 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 C21orf140B9A014 251 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 C9J4A7 227 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 H0YIG0 161 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 RRP8O43159 456 aaKnown RBP17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 RAD1O60671 282 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 PRAMEF4O60810 478 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 TIAF1O95411 115 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 ONECUT2O95948 504 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 NTRK1P04629 796 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 NEFHP12036 1026 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 CD22P20273 847 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 AVPR1BP47901 424 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 DCDP81605 110 aaKnown RBP17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 CPSF6Q16630 551 aaKnown RBP eCLIP17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 HKDC1Q2TB90 917 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 PRAMEF9Q5VWM5 478 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 TTC19Q6DKK2 380 aaPredicted RBP17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 ZNF517Q6ZMY9 492 aaPredicted RBP17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 CHSY3Q70JA7 882 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 OR4F6Q8NGB9 312 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 GAL3ST3Q96A11 431 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 KIAA1143Q96AT1 154 aaPredicted RBP17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 CMTM7Q96FZ5 175 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 GATA5Q9BWX5 397 aaPredicted RBP17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 SLC6A16Q9GZN6 736 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 ROGDIQ9GZN7 287 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 PRM3Q9NNZ6 103 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 LHX9Q9NQ69 397 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 NMRK1Q9NWW6 199 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 ZNF490Q9ULM2 529 aaPredicted RBP17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 RNF11Q9Y3C5 154 aa17.05■□□□□ 0.32
SSSCA1-201ENST00000309328 TMEM114B3SHH9 223 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 CRCPO75575 148 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 SERPINE1P05121 402 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 SERPIND1P05546 499 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 PCNAP12004 261 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 HSD3B1P14060 373 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 ALAS2P22557 587 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 PTX3P26022 381 aaPredicted RBP17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 HSD3B2P26439 372 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 TSFMP43897 325 aaKnown RBP17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 RCN2Q14257 317 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 ZRSR2Q15696 482 aaKnown RBP17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 ADPRMQ3LIE5 342 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 TTMPQ5BVD1 217 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 LETMD1Q6P1Q0 360 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 TTLL10Q6ZVT0 673 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 CACNA2D3Q8IZS8 1091 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 ARHGEF39Q8N4T4 335 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 IL22RA1Q8N6P7 574 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 ANKRD42Q8N9B4 389 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 GALNT6Q8NCL4 622 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 MDM1Q8TC05 714 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 CREB3L4Q8TEY5 395 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 AGAP11Q8TF27 550 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 ZNF473Q8WTR7 871 aaKnown RBP17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 KCNE4Q8WWG9 221 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 FKBP10Q96AY3 582 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 GBP5Q96PP8 586 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 GPR87Q9BY21 358 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 BRF2Q9HAW0 419 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 ANKHQ9HCJ1 492 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 KCND3Q9UK17 655 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 ADAMTS20P59510 1910 aa17.04■□□□□ 0.32
SSSCA1-201ENST00000309328 LRIT2A6NDA9 550 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 P2RX6O15547 441 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 NSA2O95478 260 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 CHEK2O96017 543 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 ALBP02768 609 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 RAB40ALP0C0E4 278 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 ZNF28P17035 718 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 ALOX12P18054 663 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 HMOX2P30519 316 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 STAT5AP42229 794 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 MPP2Q14168 576 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 TRIM40Q6P9F5 258 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 ZFAND4Q86XD8 727 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 AFAP1L2Q8N4X5 818 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 KDF1Q8NAX2 398 aaPredicted RBP17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 OR6Y1Q8NGX8 325 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 HUS1BQ8NHY5 278 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 WDR20Q8TBZ3 569 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 METTL6Q8TCB7 284 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 CCT6BQ92526 530 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 C10orf90Q96M02 699 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 KCNC2Q96PR1 638 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 CDK15Q96Q40 435 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 SERPINI1Q99574 410 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 MECRQ9BV79 373 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 REXO4Q9GZR2 422 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 MID1IP1Q9NPA3 183 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 DMRT3Q9NQL9 472 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 PFDN4Q9NQP4 134 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 STARD5Q9NSY2 213 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 NDOR1Q9UHB4 597 aa17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 NXT1Q9UKK6 140 aaKnown RBP17.03■□□□□ 0.32
SSSCA1-201ENST00000309328 PADI2Q9Y2J8 665 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms