RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 GALK2Q01415 458 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 BNC1Q01954 994 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 MAPKAPK3Q16644 382 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 CDKN3Q16667 212 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 NEK5Q6P3R8 708 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 SNX29P2Q8IUI4 249 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 MSRB3Q8IXL7 192 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 Q8N9G6 341 aaPredicted RBP9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 SIDT2Q8NBJ9 832 aaKnown RBP9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 GALNT11Q8NCW6 608 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 GPR26Q8NDV2 337 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 TIFAQ96CG3 184 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 ALOXE3Q9BYJ1 711 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 DSN1Q9H410 356 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 BRD9Q9H8M2 597 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 ASIC5Q9NY37 505 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 ASB1Q9Y576 335 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 PCDHB14Q9Y5E9 798 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 TRBV5-3A0A0A0MS03 114 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 A8MU76 341 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 PLK4O00444 970 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 GAPDHSO14556 408 aaPredicted RBP9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 UPK1BO75841 260 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 CCNKO75909 580 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 TRAPPC2P0DI81 140 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 TRAPPC2BP0DI82 140 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 HOXB1P14653 301 aaPredicted RBP9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 PRKACGP22612 351 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 MAGEA2P43356 314 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 MAP2K4P45985 399 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 PTSQ03393 145 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 CHRNA6Q15825 494 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 RFTN2Q52LD8 501 aaPredicted RBP9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 CTSL3PQ5NE16 218 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 TMEM236Q5W0B7 351 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 VITQ6UXI7 678 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 CACUL1Q86Y37 369 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 CD200R1Q8TD46 325 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 EEF1AKMT1Q8WVE0 214 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 OTUB2Q96DC9 234 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 MRPL38Q96DV4 380 aaKnown RBP9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 LINGO1Q96FE5 620 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 PDLIM5Q96HC4 596 aaKnown RBP9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 PYURFQ96I23 114 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 DACH2Q96NX9 599 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 CDK15Q96Q40 435 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 DEPDC7Q96QD5 511 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 MYADMQ96S97 322 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 KAT8Q9H7Z6 458 aaKnown RBP9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 SLC25A37Q9NYZ2 338 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 COL6A3P12111 3177 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 A6NL46 340 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 OR7A17O14581 309 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 SOCS5O75159 536 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 ADH1CP00326 375 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 FTH1P02794 183 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 IGFBP5P24593 272 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 NNMTP40261 264 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 CSNK1DP48730 415 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 MASP1P48740 699 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 PRIM2P49643 509 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 GZMMP51124 257 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 RIPPLY1Q0D2K3 151 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 GDPD4Q6W3E5 623 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 DET1Q7L5Y6 550 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 GOLGA7Q7Z5G4 137 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 SERPINA9Q86WD7 417 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 GALNT6Q8NCL4 622 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 OR4F6Q8NGB9 312 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 IPCEF1Q8WWN9 437 aaPredicted RBP9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 JPH3Q8WXH2 748 aaPredicted RBP9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 FGF14Q92915 247 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 ESAMQ96AP7 390 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 LGALS12Q96DT0 336 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 SCRN2Q96FV2 425 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 MMP27Q9H306 513 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 IKZF5Q9H5V7 419 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 EXD2Q9NVH0 621 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 ELOVL2Q9NXB9 296 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 MARK1Q9P0L2 795 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 B4GALT6Q9UBX8 382 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 FBXO10Q9UK96 956 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 INVSQ9Y283 1065 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 GPSM3Q9Y4H4 160 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 PRSS21Q9Y6M0 314 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 A3GALT2U3KPV4 340 aa9.96□□□□□ -0.81
APOBEC3F-201ENST00000308521 SLC28A1O00337 649 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 PDPK1O15530 556 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 RGS10O43665 173 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 OTCP00480 354 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 MT-ND2P03891 347 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 GSTM1P09488 218 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 FCARP24071 287 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 MAPK8P45983 427 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 TTPAP49638 278 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 DSTNP60981 165 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 ABRAXAS2Q15018 415 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 RAB30Q15771 203 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 GAB4Q2WGN9 574 aa9.96□□□□□ -0.82
APOBEC3F-201ENST00000308521 AGAP6Q5VW22 663 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms