RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 SLC13A3Q8WWT9 602 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 CLPTM1LQ96KA5 538 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 SPAG4Q9NPE6 437 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 PCDHGA7Q9Y5G6 932 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 ASPDHA6ND91 283 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 PLPP1O14494 284 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 NDUFS4O43181 175 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 RASSF9O75901 435 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 LRATO95237 230 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 KLK1P06870 262 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 FOXM1Q08050 763 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 ZIC1Q15915 447 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 MAPKAPK3Q16644 382 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 DUOXA1Q1HG43 343 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 TRMT5Q32P41 509 aaKnown RBP16.75■□□□□ 0.27
KRT28-201ENST00000306658 PAGE3Q5JUK9 113 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 PGM2L1Q6PCE3 622 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 SLC25A45Q8N413 288 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 MINDY1Q8N5J2 469 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 CDC26Q8NHZ8 85 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 WDR48Q8TAF3 677 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 CEP76Q8TAP6 659 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 GFM2Q969S9 779 aaKnown RBP16.75■□□□□ 0.27
KRT28-201ENST00000306658 LRRC58Q96CX6 371 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 OR52E6Q96RD3 313 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 PRPF18Q99633 342 aaKnown RBP16.75■□□□□ 0.27
KRT28-201ENST00000306658 REXO4Q9GZR2 422 aaKnown RBP16.75■□□□□ 0.27
KRT28-201ENST00000306658 TTC28Q96AY4 2481 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 MDC1Q14676 2089 aaKnown RBP16.75■□□□□ 0.27
KRT28-201ENST00000306658 ARHGAP10A1A4S6 786 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 LRIT2A6NDA9 550 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 RHPN2P1A8MT19 583 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 AKAP10O43572 662 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 DFNA5O60443 496 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 AVPR2P30518 371 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 ARFIP1P53367 373 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 MTTPP55157 894 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 CYP4F3Q08477 520 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 PGS1Q32NB8 556 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 CCNYL2Q5T2Q4 361 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 C8orf82Q6P1X6 216 aaPredicted RBP16.75■□□□□ 0.27
KRT28-201ENST00000306658 CYB5D1Q6P9G0 228 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 SLC2A7Q6PXP3 512 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 PRR23BQ6ZRT6 265 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 GPR180Q86V85 440 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 ARL10Q8N8L6 244 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 SRFBP1Q8NEF9 429 aaKnown RBP16.75■□□□□ 0.27
KRT28-201ENST00000306658 NUDT8Q8WV74 236 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 RSC1A1Q92681 617 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 THAP11Q96EK4 314 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 RMND5AQ9H871 391 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 IL1RL2Q9HB29 575 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 ADA2Q9NZK5 511 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 SLC7A8Q9UHI5 535 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 ADAM29Q9UKF5 820 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 POMT2Q9UKY4 750 aa16.75■□□□□ 0.27
KRT28-201ENST00000306658 WBP11Q9Y2W2 641 aaKnown RBP16.75■□□□□ 0.27
KRT28-201ENST00000306658 MUC3AQ02505 3323 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 CAPN5O15484 640 aaPredicted RBP16.74■□□□□ 0.27
KRT28-201ENST00000306658 CFIP05156 583 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 PROS1P07225 676 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 SP9P0CG40 484 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 COX7A2P14406 83 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 HOXB3P14651 431 aaPredicted RBP16.74■□□□□ 0.27
KRT28-201ENST00000306658 HPCAL1P37235 193 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 RPL3P39023 403 aaKnown RBP16.74■□□□□ 0.27
KRT28-201ENST00000306658 KIR3DL1P43629 444 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 EPHA4P54764 986 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 STXBP1P61764 594 aaKnown RBP16.74■□□□□ 0.27
KRT28-201ENST00000306658 HKDC1Q2TB90 917 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 WASHC2DQ5SRD0 308 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 FCRL6Q6DN72 434 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 FBXO42Q6P3S6 717 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 MSANTD1Q6ZTZ1 278 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 NET1Q7Z628 596 aaPredicted RBP16.74■□□□□ 0.27
KRT28-201ENST00000306658 NUDT13Q86X67 352 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 C10orf67Q8IYJ2 551 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 TMEM132CQ8N3T6 1108 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 ZBTB44Q8NCP5 570 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 DNAJB8Q8NHS0 232 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 BAHD1Q8TBE0 780 aaPredicted RBP16.74■□□□□ 0.27
KRT28-201ENST00000306658 GPATCH1Q9BRR8 931 aaKnown RBP16.74■□□□□ 0.27
KRT28-201ENST00000306658 MYNNQ9NPC7 610 aa16.74■□□□□ 0.27
KRT28-201ENST00000306658 TMEM131Q92545 1883 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 A0A1B0GTQ1 180 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 SCAMP2O15127 329 aaKnown RBP16.73■□□□□ 0.27
KRT28-201ENST00000306658 YKT6O15498 198 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 NUDT21O43809 227 aaKnown RBP16.73■□□□□ 0.27
KRT28-201ENST00000306658 MGRN1O60291 552 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 KCNH1O95259 989 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 GBAP04062 536 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 TPP2P29144 1249 aaPredicted RBP16.73■□□□□ 0.27
KRT28-201ENST00000306658 HNRNPH1P31943 449 aaKnown RBP16.73■□□□□ 0.27
KRT28-201ENST00000306658 BSGP35613 385 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 GSTM5P46439 218 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 CAPZBP47756 277 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 RGS1Q08116 209 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 PWP1Q13610 501 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 SHBQ15464 509 aa16.73■□□□□ 0.27
KRT28-201ENST00000306658 ADPRMQ3LIE5 342 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms