RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 CD300LGQ6UXG3 332 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 PROSER1Q86XN7 944 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 PTGES2Q9H7Z7 377 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 R4GN57 208 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 PRORSD1PA6NEY8 169 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 EFCAB7A8K855 629 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 TNFRSF10CO14798 259 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 GPR39O43194 453 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 AP1G1O43747 822 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 SLC35E2BP0CK96 405 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 SFTPCP11686 197 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 GPR68Q15743 365 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 TECRLQ5HYJ1 363 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 RPS27LQ71UM5 84 aaKnown RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 PLD6Q8N2A8 252 aaKnown RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 RASGEF1AQ8N9B8 481 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 OR56A1Q8NGH5 318 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 DNAJB8Q8NHS0 232 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 SNIP1Q8TAD8 396 aaKnown RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 THAP3Q8WTV1 239 aaPredicted RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 FBXL8Q96CD0 374 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 TLCD1Q96CP7 247 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 PEX11GQ96HA9 241 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 KCNN2Q9H2S1 579 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 ZSCAN32Q9NX65 697 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 ANKMY1Q9P2S6 941 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 SAMHD1Q9Y3Z3 626 aaKnown RBP8.92□□□□□ -0.98
PTPRE-202ENST00000306042 AP1M2Q9Y6Q5 423 aa8.92□□□□□ -0.98
PTPRE-202ENST00000306042 C17orf113A0A1B0GUU1 675 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 A0A1W2PPC4 97 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 HTRA2O43464 458 aaPredicted RBP8.91□□□□□ -0.98
PTPRE-202ENST00000306042 MAN1A2O60476 641 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 IFNW1P05000 195 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 PRSS36Q5K4E3 855 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 WASHC2DQ5SRD0 308 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF730Q6ZMV8 503 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 OR5L2Q8NGL0 311 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 APOL4Q9BPW4 351 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 SLC35A5Q9BS91 424 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 RTKNQ9BST9 563 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 NMUR2Q9GZQ4 415 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 DCLRE1BQ9H816 532 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 AKTIPQ9H8T0 292 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 TAS2R9Q9NYW1 312 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 MYO18AQ92614 2054 aaKnown RBP8.91□□□□□ -0.98
PTPRE-202ENST00000306042 KIAA1024LP59773 190 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 DCDC1P59894 354 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 ARHGAP19Q14CB8 494 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 OR4F3Q6IEY1 312 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 FRMD7Q6ZUT3 714 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 OR5AK3PQ8NH89 298 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 CD200R1Q8TD46 325 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 SLC38A2Q96QD8 506 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF446Q9NWS9 450 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 SRRM3A6NNA2 597 aaPredicted RBP8.91□□□□□ -0.98
PTPRE-202ENST00000306042 XKRYO14609 159 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 HSD3B1P14060 373 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 GABRG2P18507 467 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 DRD4P21917 467 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 HSD3B2P26439 372 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 ADSLP30566 484 aaPredicted RBP8.91□□□□□ -0.98
PTPRE-202ENST00000306042 IDH3AP50213 366 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 SLC18A2Q05940 514 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 ENPP2Q13822 863 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 NCF4Q15080 339 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 ABHD17BQ5VST6 288 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 NEK10Q6ZWH5 1172 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 KLHDC8AQ8IYD2 350 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 ZNF786Q8N393 782 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 PNPLA1Q8N8W4 532 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 FAM47BQ8NA70 645 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 DTWD2Q8NBA8 298 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 C9orf16Q9BUW7 83 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 PTRH2Q9Y3E5 179 aaKnown RBP8.91□□□□□ -0.98
PTPRE-202ENST00000306042 H0Y8X5 98 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 CNOT3O75175 753 aaKnown RBP8.91□□□□□ -0.98
PTPRE-202ENST00000306042 CST1P01037 141 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 ALDOAP04075 364 aaKnown RBP8.91□□□□□ -0.98
PTPRE-202ENST00000306042 PDHA2P29803 388 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 PIK3CBP42338 1070 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 RRADP55042 308 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 GALNT18Q6P9A2 607 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 SPESP1Q6UW49 350 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 RNF111Q6ZNA4 994 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 RFLNAQ6ZTI6 216 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 MCATQ8IVS2 390 aaKnown RBP8.91□□□□□ -0.98
PTPRE-202ENST00000306042 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTPRE-202ENST00000306042 OR10H5Q8NGA6 315 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 KCNA7Q96RP8 456 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 RPF2Q9H7B2 306 aaKnown RBP8.91□□□□□ -0.98
PTPRE-202ENST00000306042 PELI2Q9HAT8 420 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 KCNK13Q9HB14 408 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 NECTIN3Q9NQS3 549 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 SARDHQ9UL12 918 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 MKL2Q9ULH7 1088 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 AP4S1Q9Y587 144 aa8.91□□□□□ -0.98
PTPRE-202ENST00000306042 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 TMEM233B4DJY2 109 aa8.9□□□□□ -0.98
PTPRE-202ENST00000306042 TLX3O43711 291 aaPredicted RBP8.9□□□□□ -0.98
PTPRE-202ENST00000306042 HOXB6P17509 224 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms