RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 PWP1Q13610 501 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 KIRREL3Q8IZU9 778 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 CACTIN-AS1Q8N1I8 211 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 AFAP1L2Q8N4X5 818 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 CAMKVQ8NCB2 501 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 NT5CQ8TCD5 201 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 PMEPA1Q969W9 287 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 PPP1R36Q96LQ0 422 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 CTRCQ99895 268 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 OR51B5Q9H339 312 aa25.87■■□□□ 1.73
HDAC3-201ENST00000305264 SERPINA6P08185 405 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 LINC00032P0C843 101 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 ETV5P41161 510 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 ITGA1P56199 1179 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 BTKQ06187 659 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 PRTGQ2VWP7 1150 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 MAVSQ7Z434 540 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 NUF2Q9BZD4 464 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 SLC6A16Q9GZN6 736 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 KLHL31Q9H511 634 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 HMGCS1Q01581 520 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 MC2RQ01718 297 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 RGS1Q08116 209 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 TCTE1Q5JU00 501 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 PRAMEF17Q5VTA0 474 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 TMPRSS7Q7RTY8 843 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 WDR75Q8IWA0 830 aaKnown RBP25.86■■□□□ 1.73
HDAC3-201ENST00000305264 C19orf60Q96EN9 201 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 RNF31Q96EP0 1072 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 FAR2Q96K12 515 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 BRF2Q9HAW0 419 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 ADAM21Q9UKJ8 722 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 RARRES3Q9UL19 164 aa25.86■■□□□ 1.73
HDAC3-201ENST00000305264 LRIT2A6NDA9 550 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 B4E171 279 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 C4orf51C9J302 202 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 TSPAN7P41732 249 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 SEC24CP53992 1094 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 CSTF3Q12996 717 aaKnown RBP25.85■■□□□ 1.73
HDAC3-201ENST00000305264 PUM1Q14671 1186 aaKnown RBP eCLIP25.85■■□□□ 1.73
HDAC3-201ENST00000305264 C3orf38Q5JPI3 329 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 RNF165Q6ZSG1 346 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 TRIM46Q7Z4K8 759 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 GALNT15Q8N3T1 639 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 ZNF655Q8N720 491 aaPredicted RBP25.85■■□□□ 1.73
HDAC3-201ENST00000305264 OR2T11Q8NH01 316 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 THOC1Q96FV9 657 aaKnown RBP25.85■■□□□ 1.73
HDAC3-201ENST00000305264 CMTM7Q96FZ5 175 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 CHMP6Q96FZ7 201 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 C3orf30Q96M34 536 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 F2RL3Q96RI0 385 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 SERTAD3Q9UJW9 196 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 PPT2Q9UMR5 302 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 SATB2Q9UPW6 733 aa25.85■■□□□ 1.73
HDAC3-201ENST00000305264 MRPS2Q9Y399 296 aaKnown RBP25.85■■□□□ 1.73
HDAC3-201ENST00000305264 SAP18O00422 153 aaKnown RBP25.84■■□□□ 1.73
HDAC3-201ENST00000305264 PLD2O14939 933 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 HDAC3O15379 428 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 ZSCAN9O15535 394 aaPredicted RBP25.84■■□□□ 1.73
HDAC3-201ENST00000305264 TIAF1O95411 115 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 ZNF33BQ06732 778 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 EIF3IQ13347 325 aaKnown RBP25.84■■□□□ 1.73
HDAC3-201ENST00000305264 ADPRMQ3LIE5 342 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 TOR1AIP1Q5JTV8 583 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 CGB2Q6NT52 195 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 FOXR1Q6PIV2 292 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 GPR135Q8IZ08 494 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 ARHGEF39Q8N4T4 335 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 ZCCHC10Q8TBK6 192 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 PISDQ9UG56 409 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 SLC12A4Q9UP95 1085 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 CCL27Q9Y4X3 112 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 USH1CQ9Y6N9 552 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 SERTM1A2A2V5 107 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 FITM1A5D6W6 292 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 ZNF195O14628 629 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 XKR7Q5GH72 579 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 VWA5B1Q5TIE3 1220 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 KHDRBS2Q5VWX1 349 aaKnown RBP25.84■■□□□ 1.73
HDAC3-201ENST00000305264 C10orf90Q96M02 699 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 NLNQ9BYT8 704 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 REXO4Q9GZR2 422 aaKnown RBP25.84■■□□□ 1.73
HDAC3-201ENST00000305264 FBXO8Q9NRD0 319 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 ENAMQ9NRM1 1142 aa25.84■■□□□ 1.73
HDAC3-201ENST00000305264 POLR1CO15160 346 aaPredicted RBP25.83■■□□□ 1.73
HDAC3-201ENST00000305264 MED26O95402 600 aa25.83■■□□□ 1.73
HDAC3-201ENST00000305264 JMJD7P0C870 316 aa25.83■■□□□ 1.73
HDAC3-201ENST00000305264 HSD3B1P14060 373 aa25.83■■□□□ 1.73
HDAC3-201ENST00000305264 HSD3B2P26439 372 aa25.83■■□□□ 1.73
HDAC3-201ENST00000305264 MAPK10P53779 464 aa25.83■■□□□ 1.73
HDAC3-201ENST00000305264 IL11RAQ14626 422 aa25.83■■□□□ 1.73
HDAC3-201ENST00000305264 TMEM214Q6NUQ4 689 aaKnown RBP25.83■■□□□ 1.73
HDAC3-201ENST00000305264 PPP1R3BQ86XI6 285 aa25.83■■□□□ 1.73
HDAC3-201ENST00000305264 GBP7Q8N8V2 638 aaPredicted RBP25.83■■□□□ 1.73
HDAC3-201ENST00000305264 WDR36Q8NI36 951 aaKnown RBP25.83■■□□□ 1.73
HDAC3-201ENST00000305264 MS4A6EQ96DS6 147 aa25.83■■□□□ 1.73
HDAC3-201ENST00000305264 SLC39A1Q9NY26 324 aa25.83■■□□□ 1.73
HDAC3-201ENST00000305264 VTI1BQ9UEU0 232 aa25.83■■□□□ 1.73
HDAC3-201ENST00000305264 SCN3AQ9NY46 2000 aa25.82■■□□□ 1.72
HDAC3-201ENST00000305264 ATP6AP2A0A1C7CYW4 349 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms