RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 ABCB1P08183 1280 aaPredicted RBP13.67□□□□□ -0.22
RAB40A-201ENST00000304236 SRPRAP08240 638 aaKnown RBP13.67□□□□□ -0.22
RAB40A-201ENST00000304236 NBL1P41271 181 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 PLA2G16P53816 162 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 IL5RAQ01344 420 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 PPP1R8Q12972 351 aaKnown RBP13.67□□□□□ -0.22
RAB40A-201ENST00000304236 E2F2Q14209 437 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 ACOX1Q15067 660 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 ZNF77Q15935 545 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 LY6G5CQ5SRR4 150 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 LAIR2Q6ISS4 152 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 MTSS1LQ765P7 747 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 PTOV1Q86YD1 416 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 SLC22A15Q8IZD6 547 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 RASGEF1AQ8N9B8 481 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 DTWD2Q8NBA8 298 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 CHTF18Q8WVB6 975 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 FGF13Q92913 245 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 TCEAL4Q96EI5 215 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 MED8Q96G25 268 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 MTERF1Q99551 399 aaKnown RBP13.67□□□□□ -0.22
RAB40A-201ENST00000304236 PALMDQ9NP74 551 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 SLC2A4RGQ9NR83 387 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 HCFC1R1Q9NWW0 138 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 VNN3Q9NY84 501 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 KCNE2Q9Y6J6 123 aa13.67□□□□□ -0.22
RAB40A-201ENST00000304236 WDFY4Q6ZS81 3184 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 TTC34A8MYJ7 566 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 SLC9A3R1O14745 358 aaPredicted RBP13.66□□□□□ -0.22
RAB40A-201ENST00000304236 MOSPD3O75425 235 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 JRKO75564 520 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 ANGPTL1O95841 491 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 HTR1AP08908 422 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 ANXA4P09525 319 aaPredicted RBP13.66□□□□□ -0.22
RAB40A-201ENST00000304236 LAMP1P11279 417 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 TMEM115Q12893 351 aaPredicted RBP13.66□□□□□ -0.22
RAB40A-201ENST00000304236 DDX39BQ13838 428 aaKnown RBP13.66□□□□□ -0.22
RAB40A-201ENST00000304236 TMEM215Q68D42 235 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 CAPN13Q6MZZ7 669 aaPredicted RBP13.66□□□□□ -0.22
RAB40A-201ENST00000304236 PARM1Q6UWI2 310 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 CYP4Z1Q86W10 505 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 RNF175Q8N4F7 328 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 BPIFB6Q8NFQ5 453 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 AP2M1Q96CW1 435 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 COQ8BQ96D53 544 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 HSH2DQ96JZ2 352 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 PKP4Q99569 1192 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 LINC00597Q9H2U6 94 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 REEP1Q9H902 201 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 TBC1D17Q9HA65 648 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 TBCCD1Q9NVR7 557 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 SIRT5Q9NXA8 310 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 SCN3BQ9NY72 215 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 ZNF282Q9UDV7 671 aaPredicted RBP13.66□□□□□ -0.22
RAB40A-201ENST00000304236 ABCG2Q9UNQ0 655 aa13.66□□□□□ -0.22
RAB40A-201ENST00000304236 MGAT4DA6NG13 374 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 ZNF99A8MXY4 864 aaPredicted RBP13.65□□□□□ -0.22
RAB40A-201ENST00000304236 MYO1GB0I1T2 1018 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 FKBP9O95302 570 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 INHBBP09529 407 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 ELFN1P0C7U0 828 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 JUNDP17535 347 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 AGXTP21549 392 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 IMPA1P29218 277 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 DAPP51397 102 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 CTSCP53634 463 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 ITGA1P56199 1179 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 RAPSNQ13702 412 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 TEAD4Q15561 434 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 ZNF648Q5T619 568 aaPredicted RBP13.65□□□□□ -0.22
RAB40A-201ENST00000304236 MED27Q6P2C8 311 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 TMEM220Q6QAJ8 160 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 ANKRD13BQ86YJ7 626 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 C1orf52Q8N6N3 182 aaKnown RBP13.65□□□□□ -0.22
RAB40A-201ENST00000304236 ST13P5Q8NFI4 369 aaPredicted RBP13.65□□□□□ -0.22
RAB40A-201ENST00000304236 OR7G3Q8NG95 312 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 OR10Q1Q8NGQ4 319 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 CDC26Q8NHZ8 85 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 FGF14Q92915 247 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 OR4K3Q96R72 315 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 RAD21L1Q9H4I0 556 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 RIBC2Q9H4K1 309 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 LTB4R2Q9NPC1 389 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 WARS2Q9UGM6 360 aaKnown RBP13.65□□□□□ -0.22
RAB40A-201ENST00000304236 VPS4AQ9UN37 437 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 DOCK8Q8NF50 2099 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 KRT87PA6NCN2 255 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 TMEM202A6NGA9 273 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 GABRR3A8MPY1 467 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 NDUFS2O75306 463 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 PCMT1P22061 227 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 TIA1P31483 386 aaKnown RBP eCLIP13.65□□□□□ -0.22
RAB40A-201ENST00000304236 RPL3P39023 403 aaKnown RBP13.65□□□□□ -0.22
RAB40A-201ENST00000304236 MMP12P39900 470 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 BDKRB1P46663 353 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 C21orf59P57076 290 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 RAE1P78406 368 aaKnown RBP13.65□□□□□ -0.22
RAB40A-201ENST00000304236 TMED1Q13445 227 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 ANGPT1Q15389 498 aa13.65□□□□□ -0.22
RAB40A-201ENST00000304236 LIPIQ6XZB0 460 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms