RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 ZNF700Q9H0M5 742 aa10.28□□□□□ -0.76
HMGN1P35-201ENST00000303758 PELI2Q9HAT8 420 aa10.28□□□□□ -0.76
HMGN1P35-201ENST00000303758 LRRC4CQ9HCJ2 640 aa10.28□□□□□ -0.76
HMGN1P35-201ENST00000303758 PRM3Q9NNZ6 103 aa10.28□□□□□ -0.76
HMGN1P35-201ENST00000303758 IKZF3Q9UKT9 509 aa10.28□□□□□ -0.76
HMGN1P35-201ENST00000303758 SLC22A7Q9Y694 548 aa10.28□□□□□ -0.76
HMGN1P35-201ENST00000303758 KCNE2Q9Y6J6 123 aa10.28□□□□□ -0.76
HMGN1P35-201ENST00000303758 PTPN13Q12923 2485 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 LOC102723996A0A087X1L8 192 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 BLACEA4D250 179 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CLEC18AA5D8T8 446 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 URADA6NGE7 173 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CDC123O75794 336 aaPredicted RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 PIAS1O75925 651 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 SEC24DO94855 1032 aaPredicted RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 S100BP04271 92 aaPredicted RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CELA2AP08217 269 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CYC1P08574 325 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 GSTA2P09210 222 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 STMN1P16949 149 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 ALOX12P18054 663 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 GP5P40197 560 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 TSFMP43897 325 aaKnown RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 AGTR2P50052 363 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 PLTPP55058 493 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 REEP5Q00765 189 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 PWP1Q13610 501 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 SLMAPQ14BN4 828 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 PCOLCEQ15113 449 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 RBBP5Q15291 538 aaKnown RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 EIF2S3LQ2VIR3 472 aaKnown RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 BTBD16Q32M84 506 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 B3GNTL1Q67FW5 361 aaPredicted RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 TMEM205Q6UW68 189 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 FAM180AQ6UWF9 173 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CLEC18BQ6UXF7 455 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 LANCL3Q6ZV70 420 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CPEB2Q7Z5Q1 589 aaKnown RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CEP97Q8IW35 865 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CLEC18CQ8NCF0 446 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 ZNF740Q8NDX6 193 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 OR4K1Q8NGD4 311 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 ANKRD49Q8WVL7 239 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 PEX11GQ96HA9 241 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 RBBP8Q99708 897 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CPNE1Q99829 537 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 SARGQ9BW04 601 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 UNKQ9C0B0 810 aaKnown RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 SPNS1Q9H2V7 528 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 CAB39LQ9H9S4 337 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 SMYD2Q9NRG4 433 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 RYDENQ9NUL5 291 aaKnown RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 WWOXQ9NZC7 414 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 GRHL1Q9NZI5 618 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 TEKT2Q9UIF3 430 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 ZFP69BQ9UJL9 534 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 SLC22A14Q9Y267 594 aa10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 MTO1Q9Y2Z2 717 aaKnown RBP10.27□□□□□ -0.77
HMGN1P35-201ENST00000303758 SCN2AQ99250 2005 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 DOPEY2Q9Y3R5 2298 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 LRRK2Q5S007 2527 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 IGHV3-20A0A0C4DH32 117 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 A0A1W2PQ72 361 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 TCRBV9S1A1TA0A576 114 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 ANKUB1A6NFN9 424 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 CXorf49A8MYA2 514 aaPredicted RBP10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 PSMD12O00232 456 aaPredicted RBP10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 PHGDHO43175 533 aaKnown RBP10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 H2AFYO75367 372 aaKnown RBP10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 ZNF888P0CJ79 500 aaPredicted RBP10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 CCDC166P0CW27 439 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 ITGAMP11215 1152 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 GNAZP19086 355 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 IL10P22301 178 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 JAK1P23458 1154 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 STX2P32856 288 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 SPRP35270 261 aaPredicted RBP10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 AHRP35869 848 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 HNF4AP41235 474 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 SCTRP47872 440 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 SNRPNP63162 240 aaKnown RBP10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 OLR1P78380 273 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 SRSF1Q07955 248 aaKnown RBP eCLIP10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 ACTN3Q08043 901 aaPredicted RBP10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 CBLBQ13191 982 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 ZXDCQ2QGD7 858 aaPredicted RBP10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 DEFB134Q4QY38 66 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 ABHD17BQ5VST6 288 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 C8orf74Q6P047 294 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 NXPE4Q6UWF7 544 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 C3orf62Q6ZUJ4 267 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 RAPH1Q70E73 1250 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 PDSS2Q86YH6 399 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 TCAIMQ8N3R3 496 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 PPM1NQ8N819 430 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 TRPV3Q8NET8 790 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 OR5T3Q8NGG3 340 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 OR1N1Q8NGS0 311 aa10.26□□□□□ -0.77
HMGN1P35-201ENST00000303758 SUN3Q8TAQ9 357 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms