RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PARGQ86W56 976 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 COLGALT2Q8IYK4 626 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 JPH3Q8WXH2 748 aaPredicted RBP12.85□□□□□ -0.35
CASC4-201ENST00000299957 WBP2Q969T9 261 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 ALPK1Q96QP1 1244 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 MACROD1Q9BQ69 325 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 MGME1Q9BQP7 344 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 SNTNA6NMZ2 147 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 CPNE3O75131 537 aaKnown RBP12.85□□□□□ -0.35
CASC4-201ENST00000299957 PDE9AO76083 593 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 GSTM2P28161 218 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 MAPK9P45984 424 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 ASMTP46597 345 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 RAB8AP61006 207 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 PHC1P78364 1004 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 LEXMQ3ZCV2 418 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 OLIG3Q7RTU3 272 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 ZNF551Q7Z340 670 aaPredicted RBP12.85□□□□□ -0.35
CASC4-201ENST00000299957 PLD4Q96BZ4 506 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 DNAJA3Q96EY1 480 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 TMED9Q9BVK6 235 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 HSFX1Q9UBD0 423 aa12.85□□□□□ -0.35
CASC4-201ENST00000299957 J3KTA2 159 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 CCRL2O00421 344 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 MMP20O60882 483 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 OAZ2O95190 189 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 INHAP05111 366 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 ARF5P84085 180 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 RPS26P11Q5JNZ5 115 aaPredicted RBP12.84□□□□□ -0.35
CASC4-201ENST00000299957 LY6G5CQ5SRR4 150 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 SLC35F1Q5T1Q4 408 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 RSPO2Q6UXX9 243 aaPredicted RBP12.84□□□□□ -0.35
CASC4-201ENST00000299957 ZCCHC10Q8TBK6 192 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 STARD8Q92502 1023 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 CIDECQ96AQ7 238 aaPredicted RBP12.84□□□□□ -0.35
CASC4-201ENST00000299957 KCNH6Q9H252 994 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 XKR8Q9H6D3 395 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 KCNK12Q9HB15 430 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 TM9SF3Q9HD45 589 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 CCDC177Q9NQR7 707 aaPredicted RBP12.84□□□□□ -0.35
CASC4-201ENST00000299957 ATG2BQ96BY7 2078 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 A0A1B0GVC2 190 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 A6NIN4 97 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 H0YJX3 145 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 OR7A17O14581 309 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 CTDSP2O14595 271 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 TNFRSF10BO14763 440 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 SERPINB7O75635 380 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 C8GP07360 202 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 SLC35G4P0C7Q5 338 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 ACPPP15309 386 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 OLR1P78380 273 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 GPR33Q49SQ1 333 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 CATSPEREQ5SY80 951 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 LAPTM4BQ86VI4 370 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 FAM20CQ8IXL6 584 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 TEX47Q8TBZ9 253 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 P2RY13Q9BPV8 354 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 AMBRA1Q9C0C7 1298 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 DSN1Q9H410 356 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 RNF186Q9NXI6 227 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 INTS6Q9UL03 887 aaKnown RBP12.84□□□□□ -0.35
CASC4-201ENST00000299957 LTBP3Q9NS15 1303 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 FAM92AA1XBS5 289 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 H7BY64 318 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 GRM6O15303 877 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 KIAA0513O60268 411 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 CAPNS1P04632 268 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 EPHX1P07099 455 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 TCEA1P23193 301 aaKnown RBP12.84□□□□□ -0.35
CASC4-201ENST00000299957 ACRV1P26436 265 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 NTSP30990 170 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 CCR7P32248 378 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 CCT3P49368 545 aaKnown RBP12.84□□□□□ -0.35
CASC4-201ENST00000299957 CARD16Q5EG05 197 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 NEK5Q6P3R8 708 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 LHFPL3Q86UP9 236 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 IZUMO1Q8IYV9 350 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 WFDC5Q8TCV5 224 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 SLC39A13Q96H72 371 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 PRAP1Q96NZ9 151 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 MGLLQ99685 303 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 OSBPL10Q9BXB5 764 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 SP140LQ9H930 580 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 GPR52Q9Y2T5 361 aa12.84□□□□□ -0.35
CASC4-201ENST00000299957 A0A1W2PPK0 400 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 LEFTY1O75610 366 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 CCNYL3P0C7X3 344 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 CSTF2P33240 577 aaKnown RBP eCLIP12.83□□□□□ -0.36
CASC4-201ENST00000299957 IDUAP35475 653 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 MTAPQ13126 283 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 SGCGQ13326 291 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 PPIGQ13427 754 aaKnown RBP eCLIP12.83□□□□□ -0.36
CASC4-201ENST00000299957 C11orf24Q96F05 449 aaPredicted RBP12.83□□□□□ -0.36
CASC4-201ENST00000299957 THG1LQ9NWX6 298 aaKnown RBP12.83□□□□□ -0.36
CASC4-201ENST00000299957 RBM47A0AV96 593 aaKnown RBP12.83□□□□□ -0.36
CASC4-201ENST00000299957 SLC31A1O15431 190 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 FAM163BP0C2L3 166 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 ATF6P18850 670 aa12.83□□□□□ -0.36
CASC4-201ENST00000299957 SOX3P41225 446 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms