RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 PROX2Q3B8N5 592 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 CNKSR3Q6P9H4 555 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 PRSS48Q7RTY5 328 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 OR6Q1Q8NGQ2 317 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 SPPL2AQ8TCT8 520 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 TMEM159Q96B96 161 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 COQ8BQ96D53 544 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 FEVQ99581 238 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 EPYCQ99645 322 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 DOHHQ9BU89 302 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 RUBCNLQ9H714 662 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 HMG20AQ9NP66 347 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 NDUFAF4Q9P032 175 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 GULP1Q9UBP9 304 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 ACSL6Q9UKU0 697 aa13.11□□□□□ -0.31
BCCIP-202ENST00000299130 HELZP42694 1942 aaKnown RBP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 SLC5A10A0PJK1 596 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 KRBA1A5PL33 1030 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 WASH3PC4AMC7 463 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 AP2A2O94973 939 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 IMPDH2P12268 514 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 CD36P16671 472 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 ZNF30P17039 623 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 CDH3P22223 829 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 WEE1P30291 646 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 LIPAP38571 399 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 HNF4AP41235 474 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 MEF2AQ02078 507 aaPredicted RBP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 FOXD4Q12950 439 aaPredicted RBP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 TSTA3Q13630 321 aaPredicted RBP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 BRAT1Q6PJG6 821 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 TMPRSS11BQ86T26 416 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 ADCK1Q86TW2 530 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 CCDC103Q8IW40 242 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 RBM12BQ8IXT5 1001 aaKnown RBP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 TRAM1L1Q8N609 369 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 SLC5A8Q8N695 610 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 OR56A3Q8NH54 315 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 BTN2A2Q8WVV5 523 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 CIDECQ96AQ7 238 aaPredicted RBP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 TAMM41Q96BW9 452 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 LGALS12Q96DT0 336 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 HRASLS5Q96KN8 279 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 MAGEB10Q96LZ2 347 aaPredicted RBP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 HEPHQ9BQS7 1158 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 MROQ9BYG7 248 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 SLC6A14Q9UN76 642 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 LYVE1Q9Y5Y7 322 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 MGAT4DA6NG13 374 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 M0R129 80 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 KLHL18O94889 574 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 CYP2A6P11509 494 aaPredicted RBP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 LAG3P18627 525 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 TIA1P31483 386 aaKnown RBP eCLIP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 PCGF2P35227 344 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 CBX3Q13185 183 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 DGUOKQ16854 277 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 MPEG1Q2M385 716 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 LILRA6Q6PI73 481 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 TMEM220Q6QAJ8 160 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 SLC39A5Q6ZMH5 540 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 SLCO4C1Q6ZQN7 724 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 TRIM74Q86UV6 250 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 MRGPRX3Q96LB0 322 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 GABARAPL3Q9BY60 117 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 WDR12Q9GZL7 423 aaKnown RBP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 SLIRPQ9GZT3 109 aaKnown RBP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 SPNS1Q9H2V7 528 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 BRF2Q9HAW0 419 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 ADPRHL2Q9NX46 363 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.1□□□□□ -0.31
BCCIP-202ENST00000299130 HCFC2Q9Y5Z7 792 aa13.1□□□□□ -0.31
BCCIP-202ENST00000299130 J3KTA2 159 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 M0R082 166 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 TNFRSF11BO00300 401 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 RFPL2O75678 378 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 C6orf47O95873 294 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
BCCIP-202ENST00000299130 NUDT6P53370 316 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 METAP1P53582 386 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 DCDC1P59894 354 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 SELENOWP63302 87 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 ZNF33BQ06732 778 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 TMEM115Q12893 351 aaPredicted RBP13.09□□□□□ -0.31
BCCIP-202ENST00000299130 DNASE1L3Q13609 305 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 GRIN2CQ14957 1233 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 HIST2H2ACQ16777 129 aaPredicted RBP13.09□□□□□ -0.31
BCCIP-202ENST00000299130 LY6G5CQ5SRR4 150 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 FAM180BQ6P0A1 224 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 ARMCX6Q7L4S7 300 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 ANKRD33Q7Z3H0 272 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 CAMKMTQ7Z624 323 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 TECPR1Q7Z6L1 1165 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 SVOPQ8N4V2 548 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 OR5AK3PQ8NH89 298 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 WDR48Q8TAF3 677 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 ITFG2Q969R8 447 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 NIPSNAP1Q9BPW8 284 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 BCL7BQ9BQE9 202 aa13.09□□□□□ -0.31
BCCIP-202ENST00000299130 ZBP1Q9H171 429 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms