RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 VPS35Q96QK1 796 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 DSN1Q9H410 356 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 TMEM229AB2RXF0 380 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 TEX28O15482 410 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 PQBP1O60828 265 aaKnown RBP13.17□□□□□ -0.3
NCSTN-201ENST00000294785 ATG13O75143 517 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 RFPL2O75678 378 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 ITGA2P17301 1181 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 RECQLP46063 649 aaPredicted RBP13.17□□□□□ -0.3
NCSTN-201ENST00000294785 DMC1Q14565 340 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 FBXO43Q4G163 708 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 PERM1Q5SV97 790 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 TMEM236Q5W0B7 351 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 HSD11B1LQ7Z5J1 315 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 DEFB128Q7Z7B8 93 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 DEPDC4Q8N2C3 294 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 OR4A15Q8NGL6 344 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 SCAMP4Q969E2 229 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 ZNF689Q96CS4 500 aaPredicted RBP13.17□□□□□ -0.3
NCSTN-201ENST00000294785 OR4K3Q96R72 315 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 CFHR5Q9BXR6 569 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 THSD1Q9NS62 852 aa13.17□□□□□ -0.3
NCSTN-201ENST00000294785 ISPDA4D126 451 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 CLCA1A8K7I4 914 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 ADAM23O75077 832 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 ETHE1O95571 254 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 LRG1P02750 347 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 LCKP06239 509 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 CLK1P49759 484 aaKnown RBP13.16□□□□□ -0.3
NCSTN-201ENST00000294785 IFITM3Q01628 133 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 PPIGQ13427 754 aaKnown RBP eCLIP13.16□□□□□ -0.31e-7■□□□□ 8.7
NCSTN-201ENST00000294785 IFI44LQ53G44 452 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 LRRC73Q5JTD7 316 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 Q6ZVU0 165 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
NCSTN-201ENST00000294785 CHST14Q8NCH0 376 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 OR2A12Q8NGT7 310 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 HUS1BQ8NHY5 278 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 AUTS2Q8WXX7 1259 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 FOPNLQ96NB1 174 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 NDUFAF4Q9P032 175 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 ENOPH1Q9UHY7 261 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 KCNE2Q9Y6J6 123 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 GNG14A0A1W2PPG7 69 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 SLC5A10A0PJK1 596 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 TSPAN11A1L157 253 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 OR2AG2A6NM03 316 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 TAF4O00268 1085 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 PCDH7O60245 1069 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 CDK1P06493 297 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 CTSAP10619 480 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 PABPC1P11940 636 aaKnown RBP13.16□□□□□ -0.3
NCSTN-201ENST00000294785 IMPA1P29218 277 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 PRLHRP49683 370 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 ZNF763Q0D2J5 394 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.16□□□□□ -0.32e-30■□□□□ 8.5
NCSTN-201ENST00000294785 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 MED27Q6P2C8 311 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 CNKSR3Q6P9H4 555 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 USP43Q70EL4 1123 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 CCDC80Q76M96 950 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 NAGSQ8N159 534 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 DNAJC22Q8N4W6 341 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 FBXO15Q8NCQ5 510 aaPredicted RBP13.16□□□□□ -0.3
NCSTN-201ENST00000294785 DENND6BQ8NEG7 585 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 MCFD2Q8NI22 146 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 SPPL2AQ8TCT8 520 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 BTN2A2Q8WVV5 523 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 FEVQ99581 238 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 ALOXE3Q9BYJ1 711 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 DCSTAMPQ9H295 470 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 TMEM38AQ9H6F2 299 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 REEP4Q9H6H4 257 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 SPASTQ9UBP0 616 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 SLCO3A1Q9UIG8 710 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 SAGE2PA6NJ88 616 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 ZNF197O14709 1029 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 AIREO43918 545 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 TNFRSF21O75509 655 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 GCM2O75603 506 aaPredicted RBP13.16□□□□□ -0.3
NCSTN-201ENST00000294785 CTSKP43235 329 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 EIF4HQ15056 248 aaKnown RBP13.16□□□□□ -0.3
NCSTN-201ENST00000294785 ZNF284Q2VY69 593 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 ZNF404Q494X3 552 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 PAGE2Q7Z2X7 111 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 TSEN54Q7Z6J9 526 aaKnown RBP13.16□□□□□ -0.3
NCSTN-201ENST00000294785 OR10G2Q8NGC3 310 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 OR52N2Q8NGI0 321 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 OR4C15Q8NGM1 316 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 UBE2FQ969M7 185 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 RAD9AQ99638 391 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 HEPHQ9BQS7 1158 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 CCM2Q9BSQ5 444 aa13.16□□□□□ -0.3
NCSTN-201ENST00000294785 FOXE1O00358 373 aaPredicted RBP13.15□□□□□ -0.3
NCSTN-201ENST00000294785 SLC16A8O95907 504 aa13.15□□□□□ -0.3
NCSTN-201ENST00000294785 MVDP53602 400 aa13.15□□□□□ -0.3
NCSTN-201ENST00000294785 MICAQ29983 383 aa13.15□□□□□ -0.3
NCSTN-201ENST00000294785 Q6ZVL8 140 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms