RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 RNF6Q9Y252 685 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 GPSM3Q9Y4H4 160 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 HSPB11Q9Y547 144 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 PCDHGB7Q9Y5F8 929 aa11.48□□□□□ -0.57
SYNGAP1-201ENST00000293748 CLIC1O00299 241 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ERP29P30040 261 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 CORO1AP31146 461 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 NSG1P42857 185 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 DNASE1L1P49184 302 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 XKP51811 444 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 DEFA5Q01523 94 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ABHD18Q0P651 414 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 RUNX3Q13761 415 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZC3HC1Q86WB0 502 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 CCDC28AQ8IWP9 274 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 OXR1Q8N573 874 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLC9A6Q92581 669 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 EFHD2Q96C19 240 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZBED6CLQ96FA7 236 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZSWIM3Q96MP5 696 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 CCSER2Q9H7U1 834 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF395Q9H8N7 513 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 C14orf105Q9NVL8 296 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 UCKL1Q9NWZ5 548 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 HECAQ9UBI9 543 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 MEMO1Q9Y316 297 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 PCDHGB1Q9Y5G3 927 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 KANTRA0A1W2PQU2 76 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 H0YJX3 145 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 COCHO43405 550 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ENTPD6O75354 484 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 SCGNO76038 276 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 HLA-DPB1P04440 258 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 GLULP15104 373 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ITPKBP27987 946 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 MAGEA8P43361 318 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 KCNC3Q14003 757 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 CRB2Q5IJ48 1285 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 TPRG1Q6ZUI0 275 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 NATD1Q8N6N6 113 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 SIDT2Q8NBJ9 832 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF563Q8TA94 476 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 GEMIN6Q8WXD5 167 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ACOT12Q8WYK0 555 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 OR8D1Q8WZ84 308 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ACDQ96AP0 544 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 BIRC7Q96CA5 298 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLC35G5Q96KT7 338 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLC39A3Q9BRY0 314 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 RDH8Q9NYR8 311 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 FKBP7Q9Y680 259 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 PIAS3Q9Y6X2 628 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 TLR4O00206 839 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 APOL3O95236 402 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 LATS1O95835 1130 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 RLN2P04090 185 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF182P17025 639 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 TSPAN5P62079 268 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 PPP3R1P63098 170 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ASCC1Q8N9N2 400 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLC37A3Q8NCC5 494 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ESAMQ96AP7 390 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 CDADC1Q9BWV3 514 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 POLR3BQ9NW08 1133 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 SOHLH2Q9NX45 425 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 WNT16Q9UBV4 365 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 EVLQ9UI08 416 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 MAU2Q9Y6X3 613 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 OR2AT4A6NND4 320 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 IQCF5A8MTL0 148 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 GIMD1P0DJR0 217 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 BMP1P13497 986 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 STOMP27105 288 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 IL1R2P27930 398 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ATP4BP51164 291 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 ARSFP54793 590 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 HTR4Q13639 388 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 RFTN1Q14699 578 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 TCEAL1Q15170 157 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 MLF2Q15773 248 aaPredicted RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 TANGO2Q6ICL3 276 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 MARCH9Q86YJ5 346 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 SEC14L1Q92503 715 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 HMCESQ96FZ2 354 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 MND1Q9BWT6 205 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 GTPBP2Q9BX10 602 aaKnown RBP11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 PCDHGC4Q9Y5F7 938 aa11.47□□□□□ -0.57
SYNGAP1-201ENST00000293748 DLGAP1O14490 977 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 DCLK1O15075 740 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 FFAR2O15552 330 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 SLITRK5O94991 958 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 ADH5P11766 374 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 KHKP50053 298 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 CRISP3P54108 245 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 SIGLEC14Q08ET2 396 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 TMEM31Q5JXX7 168 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 PARM1Q6UWI2 310 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 C1orf216Q8TAB5 229 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF696Q9H7X3 374 aa11.46□□□□□ -0.57
SYNGAP1-201ENST00000293748 ZNF639Q9UID6 485 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms