RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 KCNA7Q96RP8 456 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 CLCC1Q96S66 551 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 SDC2P34741 201 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 AGTR2P50052 363 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 IQCCQ4KMZ1 466 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 NCEH1Q6PIU2 408 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 RPS27LQ71UM5 84 aaKnown RBP17.92■□□□□ 0.46
PCDH1-201ENST00000287008 FAR1Q8WVX9 515 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 SLC39A3Q9BRY0 314 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 RBCK1Q9BYM8 510 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 TBC1D17Q9HA65 648 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 TCF7L1Q9HCS4 588 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 FZD3Q9NPG1 666 aa17.92■□□□□ 0.46
PCDH1-201ENST00000287008 ANXA2P2A6NMY6 339 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 NOBOXO60393 691 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 C6orf47O95873 294 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 ANXA2P07355 339 aaKnown RBP17.91■□□□□ 0.46
PCDH1-201ENST00000287008 SRCP12931 536 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 EIF2B2P49770 351 aaKnown RBP17.91■□□□□ 0.46
PCDH1-201ENST00000287008 ADGRE1Q14246 886 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 PSAPL1Q6NUJ1 521 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 NRROSQ86YC3 692 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 GHDCQ8N2G8 530 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 METTL27Q8N6F8 245 aaPredicted RBP17.91■□□□□ 0.46
PCDH1-201ENST00000287008 ZNF689Q96CS4 500 aaPredicted RBP17.91■□□□□ 0.46
PCDH1-201ENST00000287008 ASB9Q96DX5 294 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 HHIPL1Q96JK4 782 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 SEC61A2Q9H9S3 476 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 KIF13AQ9H1H9 1805 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 TP53I11O14683 189 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 ARPC2O15144 300 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 OR2B3O76000 313 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 DNAJA1P31689 397 aaKnown RBP17.91■□□□□ 0.46
PCDH1-201ENST00000287008 DNAJB13P59910 316 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 KIAA0319Q5VV43 1072 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 PLET1Q6UQ28 207 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 OR4K1Q8NGD4 311 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 RHEBL1Q8TAI7 183 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 RANBP9Q96S59 729 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 REEP4Q9H6H4 257 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 LMAN1LQ9HAT1 526 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 ABCB9Q9NP78 766 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 RNH1P13489 461 aaKnown RBP17.91■□□□□ 0.46
PCDH1-201ENST00000287008 WNT7BP56706 349 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 NIPAL4Q0D2K0 466 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 PDCD4Q53EL6 469 aaKnown RBP17.91■□□□□ 0.46
PCDH1-201ENST00000287008 OR2T5Q6IEZ7 315 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 KLHDC10Q6PID8 442 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 ZNF676Q8N7Q3 588 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 OR2T29Q8NH02 315 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 NFKBIDQ8NI38 313 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 CANT1Q8WVQ1 401 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 HCN2Q9UL51 889 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 MYH11P35749 1972 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 FAM240BA0A1B0GVZ2 78 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 A0A1W2PQ72 361 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 WASHC1A8K0Z3 465 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 WASH3PC4AMC7 463 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 ZNF3P17036 446 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 DAG1Q14118 895 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 WASH2PQ6VEQ5 465 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 TMEM135Q86UB9 458 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 TSACCQ96A04 125 aaPredicted RBP17.91■□□□□ 0.46
PCDH1-201ENST00000287008 DIRAS2Q96HU8 199 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 STRA6Q9BX79 667 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 GIN1Q9NXP7 522 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 NOX1Q9Y5S8 564 aa17.91■□□□□ 0.46
PCDH1-201ENST00000287008 H3BNX3 289 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 EI24O14681 340 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 S1PR4O95977 384 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 BMP8BP34820 402 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 BMP8AQ7Z5Y6 402 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 PLXDC1Q8IUK5 500 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 NAT14Q8WUY8 206 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.9■□□□□ 0.46
PCDH1-201ENST00000287008 HCFC1R1Q9NWW0 138 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 EME2A4GXA9 379 aaPredicted RBP17.9■□□□□ 0.46
PCDH1-201ENST00000287008 TNFRSF10BO14763 440 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 MUSKO15146 869 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 SNX4O95219 450 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 DHFRP00374 187 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 MATN1P21941 496 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 SLC6A9P48067 706 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 SCD5Q86SK9 330 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 P2RY8Q86VZ1 359 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 CHST14Q8NCH0 376 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 PJA1Q8NG27 643 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 PGAP3Q96FM1 320 aaPredicted RBP17.9■□□□□ 0.46
PCDH1-201ENST00000287008 IL17FQ96PD4 163 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 TRIB3Q96RU7 358 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 COQ10BQ9H8M1 238 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 AMBNQ9NP70 447 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 SLC7A8Q9UHI5 535 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 PCDHGB5Q9Y5G0 923 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 MATN2O00339 956 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 KCNJ13O60928 360 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 HNRNPA2B1P22626 353 aaKnown RBP17.9■□□□□ 0.46
PCDH1-201ENST00000287008 KCNC1P48547 511 aa17.9■□□□□ 0.46
PCDH1-201ENST00000287008 ZNF41P51814 821 aaPredicted RBP17.9■□□□□ 0.46
PCDH1-201ENST00000287008 MTTPP55157 894 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms