RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 DCDC2Q9UHG0 476 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 NXT1Q9UKK6 140 aaKnown RBP6.21□□□□□ -1.42
CD44-204ENST00000279452 POLHQ9Y253 713 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 NAALAD2Q9Y3Q0 740 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 PCDHGA6Q9Y5G7 932 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 UNC13CQ8NB66 2214 aa6.21□□□□□ -1.42
CD44-204ENST00000279452 KIF26BQ2KJY2 2108 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 A0A088AWK7 358 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 STX16-NPEPL1H3BU86 382 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 PSMD12O00232 456 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 SAP18O00422 153 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 E2F3O00716 465 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 STX16O14662 325 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 TERTO14746 1132 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 RGS16O15492 202 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 ERI3O43414 337 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 KLK8O60259 260 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 SPAG7O75391 227 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 CRCPO75575 148 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 CDC123O75794 336 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 SUPT7LO94864 414 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 NSA2O95478 260 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 B3GALT4O96024 378 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 CAPN1P07384 714 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 HEXBP07686 556 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 GSTA1P08263 222 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 FURINP09958 794 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 FAM87AP0C7U9 286 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 MYZAPP0CAP1 466 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 ALOX12P18054 663 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 ZNF10P21506 573 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 ATP5F1P24539 256 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 GSTM2P28161 218 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 HPDP32754 393 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 XCR1P46094 333 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 RAP1GDS1P52306 607 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 PLA2G16P53816 162 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 EMP3P54852 163 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 CDH13P55290 713 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 BTN3A2P78410 334 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 KLC1Q07866 573 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 TGM3Q08188 693 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 ATP1A4Q13733 1029 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 DSG2Q14126 1118 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 FAM53BQ14153 422 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 PCBP2Q15366 365 aaKnown RBP eCLIP6.2□□□□□ -1.42
CD44-204ENST00000279452 NKG7Q16617 165 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 TBR1Q16650 682 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 UGT8Q16880 541 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 SGO1Q5FBB7 561 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 VWA2Q5GFL6 755 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 CFAP157Q5JU67 520 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 ADNP2Q6IQ32 1131 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 GRHL2Q6ISB3 625 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 TRIM40Q6P9F5 258 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 ZNF517Q6ZMY9 492 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 RPS27LQ71UM5 84 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 OVCH1Q7RTY7 1134 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 SLC22A9Q8IVM8 553 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 MREGQ8N565 214 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 OR2Y1Q8NGV0 311 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 OR51Q1Q8NH59 317 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 NT5CQ8TCD5 201 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 STT3BQ8TCJ2 826 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 TRPC4APQ8TEL6 797 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 MZB1Q8WU39 189 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 APOBEC4Q8WW27 367 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 METTL21AQ8WXB1 218 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 THAP4Q8WY91 577 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 GAL3ST3Q96A11 431 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 MTFMTQ96DP5 389 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 MVB12AQ96EY5 273 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 PEX11GQ96HA9 241 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 APOPT1Q96IL0 206 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 NSUN5Q96P11 429 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 UBL7Q96S82 380 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 CENPKQ9BS16 269 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 ROPN1BQ9BZX4 212 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 REXO4Q9GZR2 422 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 C12orf65Q9H3J6 166 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 EHD1Q9H4M9 534 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 WDR54Q9H977 334 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 ROPN1Q9HAT0 212 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 MKKSQ9NPJ1 570 aaPredicted RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 SLC22A11Q9NSA0 550 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 C14orf105Q9NVL8 296 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 MID2Q9UJV3 735 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 C3orf18Q9UK00 162 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 PCTPQ9UKL6 214 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 RAB21Q9UL25 225 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 GRID1Q9ULK0 1009 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 G3BP2Q9UN86 482 aaKnown RBP6.2□□□□□ -1.42
CD44-204ENST00000279452 MAP4K5Q9Y4K4 846 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 SDK2Q58EX2 2172 aa6.2□□□□□ -1.42
CD44-204ENST00000279452 GOLGA6L10A6NI86 522 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 A6NL46 340 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 H0YIG0 161 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 ERVH48-1M5A8F1 160 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 OR7A17O14581 309 aa6.19□□□□□ -1.42
CD44-204ENST00000279452 FOXS1O43638 330 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms