RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 FASTKQ14296 549 aaKnown RBP17.1■□□□□ 0.33
SEC22C-202ENST00000273156 SMU1Q2TAY7 513 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 PRAMEF13Q5VWM6 474 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 FRG2Q64ET8 278 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 SUSD1Q6UWL2 747 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 TMPRSS9Q7Z410 1059 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 FNDC5Q8NAU1 212 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 NEIL2Q969S2 332 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 MTFMTQ96DP5 389 aaKnown RBP17.1■□□□□ 0.33
SEC22C-202ENST00000273156 CCDC74BQ96LY2 380 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 FRG2BQ96QU4 278 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 CCNL2Q96S94 520 aaPredicted RBP17.1■□□□□ 0.33
SEC22C-202ENST00000273156 UCK1Q9HA47 277 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 FARSBQ9NSD9 589 aaKnown RBP17.1■□□□□ 0.33
SEC22C-202ENST00000273156 GIMAP2Q9UG22 337 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 PCDHGA11Q9Y5H2 935 aa17.1■□□□□ 0.33
SEC22C-202ENST00000273156 COL27A1Q8IZC6 1860 aaPredicted RBP17.09■□□□□ 0.33
SEC22C-202ENST00000273156 TRBV23OR9-2A0A075B6M9 112 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 SERTM1A2A2V5 107 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 OR52A4PA6NMU1 304 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 H0YIV9 168 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 PRAMEF4O60810 478 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 EMX2Q04743 252 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 MAD2L1Q13257 205 aaPredicted RBP17.09■□□□□ 0.33
SEC22C-202ENST00000273156 CLN3Q13286 438 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 LAPTM5Q13571 262 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 AP5B1Q2VPB7 878 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 PAGE2BQ5JRK9 111 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 PRAMEF9Q5VWM5 478 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 NKAIN2Q5VXU1 208 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 ZNF574Q6ZN55 896 aaPredicted RBP17.09■□□□□ 0.33
SEC22C-202ENST00000273156 CCDC81Q6ZN84 652 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 SLCO4C1Q6ZQN7 724 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 RINLQ6ZS11 566 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 MIER2Q8N344 545 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 POU5F2Q8N7G0 328 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 SLC5A11Q8WWX8 675 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 RAB3IPQ96QF0 476 aaPredicted RBP17.09■□□□□ 0.33
SEC22C-202ENST00000273156 HBEGFQ99075 208 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 EFCAB11Q9BUY7 163 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 C1orf21Q9H246 121 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 EHD1Q9H4M9 534 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 TAS2R1Q9NYW7 299 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 PDP2Q9P2J9 529 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 CPNE7Q9UBL6 633 aa17.09■□□□□ 0.33
SEC22C-202ENST00000273156 ERVH48-1M5A8F1 160 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 LSM1O15116 133 aaKnown RBP17.08■□□□□ 0.32
SEC22C-202ENST00000273156 ATXN7O15265 892 aaPredicted RBP17.08■□□□□ 0.32
SEC22C-202ENST00000273156 EML2O95834 649 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 PDYNP01213 254 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 C1GALT1C1LP0DN25 315 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 LIPCP11150 499 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 NQO1P15559 274 aaKnown RBP17.08■□□□□ 0.32
SEC22C-202ENST00000273156 XRCC1P18887 633 aaPredicted RBP17.08■□□□□ 0.32
SEC22C-202ENST00000273156 RAB28P51157 221 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 MAPK10P53779 464 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 E2F2Q14209 437 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 C16orf72Q14CZ0 275 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 HIST2H2ACQ16777 129 aaPredicted RBP17.08■□□□□ 0.32
SEC22C-202ENST00000273156 ATG9BQ674R7 924 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 HIST2H2AA3Q6FI13 130 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 TMPRSS11BQ86T26 416 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 PARP9Q8IXQ6 854 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 KIF2BQ8N4N8 673 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 HMGCLL1Q8TB92 370 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 REPS1Q96D71 796 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 WDR34Q96EX3 536 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 WBP1Q96G27 269 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 TAAR9Q96RI9 348 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 MENTQ9BUN1 341 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 ASPSCR1Q9BZE9 553 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 KIR3DX1Q9H7L2 352 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 SCHIP1Q9P0W5 487 aaPredicted RBP17.08■□□□□ 0.32
SEC22C-202ENST00000273156 CCL27Q9Y4X3 112 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 PCDHGA3Q9Y5H0 932 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 UNC13CQ8NB66 2214 aa17.08■□□□□ 0.32
SEC22C-202ENST00000273156 ARHGEF17Q96PE2 2063 aaPredicted RBP17.08■□□□□ 0.32
SEC22C-202ENST00000273156 LILRA5A6NI73 299 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 K7ENP7 123 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 HOXB3P14651 431 aaPredicted RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 ITIH1P19827 911 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 MRPL19P49406 292 aaKnown RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 STX5Q13190 355 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 DNAL1Q4LDG9 190 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 AGKQ53H12 422 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 C10orf62Q5T681 223 aaPredicted RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 ARHGAP40Q5TG30 622 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 MED27Q6P2C8 311 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 INO80CQ6PI98 192 aaPredicted RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 NXPE4Q6UWF7 544 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 SNX32Q86XE0 403 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 TRIM48Q8IWZ4 208 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 RBM12BQ8IXT5 1001 aaKnown RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 C2orf73Q8N5S3 287 aaPredicted RBP17.07■□□□□ 0.32
SEC22C-202ENST00000273156 OR52E1Q8NGJ3 308 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 CXorf40BQ96DE9 158 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 TBC1D10AQ9BXI6 508 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 LRTM1Q9HBL6 345 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 CPNE5Q9HCH3 593 aa17.07■□□□□ 0.32
SEC22C-202ENST00000273156 SDR39U1Q9NRG7 319 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms