RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 OR4K3Q96R72 315 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 AARSD1Q9BTE6 412 aaKnown RBP8.43□□□□□ -1.06
TPM3-201ENST00000271850 AICDAQ9GZX7 198 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 TSPAN10Q9H1Z9 355 aaPredicted RBP8.43□□□□□ -1.06
TPM3-201ENST00000271850 FAM114A2Q9NRY5 505 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 STMN3Q9NZ72 180 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 KLHL42Q9P2K6 505 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 SLC17A6Q9P2U8 582 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 SEC14L3Q9UDX4 400 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 CDC14AQ9UNH5 594 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 PDE10AQ9Y233 779 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 ZKSCAN5Q9Y2L8 839 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 C2CD3Q4AC94 2353 aa8.43□□□□□ -1.06
TPM3-201ENST00000271850 A8MUI8 341 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 E5RI56 91 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 ADAM10O14672 748 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 PRPF4O43172 522 aaKnown RBP eCLIP8.42□□□□□ -1.06
TPM3-201ENST00000271850 SLC19A2O60779 497 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 BANF1O75531 89 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 CDC123O75794 336 aaPredicted RBP8.42□□□□□ -1.06
TPM3-201ENST00000271850 CCNDBP1O95273 360 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 CDH1P12830 882 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 ELAVL4P26378 380 aaKnown RBP8.42□□□□□ -1.06
TPM3-201ENST00000271850 HTR1EP28566 365 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 HSD17B2P37059 387 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 KIR3DL1P43629 444 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 CDKN2DP55273 166 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 HSF1Q00613 529 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 MEF2AQ02078 507 aaPredicted RBP8.42□□□□□ -1.06
TPM3-201ENST00000271850 CBLBQ13191 982 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 BTBD16Q32M84 506 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 MINDY4Q4G0A6 757 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 ACER2Q5QJU3 275 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 RBM20Q5T481 1227 aaKnown RBP8.42□□□□□ -1.06
TPM3-201ENST00000271850 LYPD4Q6UWN0 246 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 C4orf22Q6V702 233 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 Q6ZPB1 254 aaPredicted RBP8.42□□□□□ -1.06
TPM3-201ENST00000271850 ZNF662Q6ZS27 426 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 UBE2R2Q712K3 238 aaPredicted RBP8.42□□□□□ -1.06
TPM3-201ENST00000271850 GSTA5Q7RTV2 222 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 PCGF5Q86SE9 256 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 SLC26A11Q86WA9 606 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 KIF2BQ8N4N8 673 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 ZNF808Q8N4W9 903 aaPredicted RBP8.42□□□□□ -1.06
TPM3-201ENST00000271850 NAT8LQ8N9F0 302 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 ACBD4Q8NC06 268 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 ZNF740Q8NDX6 193 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 MCUQ8NE86 351 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 DNAJB8Q8NHS0 232 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 EEF1AKMT1Q8WVE0 214 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 MS4A14Q96JA4 679 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 LURAP1Q96LR2 239 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 GPR137Q96N19 417 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 NDNQ99608 321 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 WDR83Q9BRX9 315 aaKnown RBP8.42□□□□□ -1.06
TPM3-201ENST00000271850 TRIM51Q9BSJ1 452 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 SGPP1Q9BX95 441 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 TSGA10Q9BZW7 698 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 ATG10Q9H0Y0 220 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 LZTFL1Q9NQ48 299 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 TMEM184CQ9NVA4 438 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 MTORP42345 2549 aa8.42□□□□□ -1.06
TPM3-201ENST00000271850 NF1P21359 2839 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 CTAGE9A4FU28 777 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 AP3B1O00203 1094 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 CEP104O60308 925 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 CRYABP02511 175 aaKnown RBP8.41□□□□□ -1.06
TPM3-201ENST00000271850 KRT14P02533 472 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 MLNP12872 115 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 ENO3P13929 434 aaPredicted RBP8.41□□□□□ -1.06
TPM3-201ENST00000271850 NPPBP16860 134 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 AVPR1BP47901 424 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 RPS15AP62244 130 aaKnown RBP8.41□□□□□ -1.06
TPM3-201ENST00000271850 OLR1P78380 273 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 DHX9Q08211 1270 aaKnown RBP8.41□□□□□ -1.06
TPM3-201ENST00000271850 HYAL2Q12891 473 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 PTK6Q13882 451 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 USP10Q14694 798 aaKnown RBP8.41□□□□□ -1.06
TPM3-201ENST00000271850 OR1C1Q15619 314 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 SFT2D3Q587I9 215 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 ABHD17BQ5VST6 288 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 CASC4Q6P4E1 433 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 PAPD4Q6PIY7 484 aaKnown RBP8.41□□□□□ -1.06
TPM3-201ENST00000271850 PAQR3Q6TCH7 311 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 TMEM207Q6UWW9 146 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 IGDCC3Q8IVU1 814 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 TXLNBQ8N3L3 684 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 RASGEF1CQ8N431 466 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 PLPP5Q8NEB5 264 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 ELP5Q8TE02 316 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 PEX11GQ96HA9 241 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 SPOCK3Q9BQ16 436 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 SARGQ9BW04 601 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 MMP25Q9NPA2 562 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 CCDC177Q9NQR7 707 aaPredicted RBP8.41□□□□□ -1.06
TPM3-201ENST00000271850 KLHL1Q9NR64 748 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 FBXO5Q9UKT4 447 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 NAALAD2Q9Y3Q0 740 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 ASB1Q9Y576 335 aa8.41□□□□□ -1.06
TPM3-201ENST00000271850 PCDHGB6Q9Y5F9 930 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms