RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 MRPL3P09001 348 aaKnown RBP17.46■□□□□ 0.38
COL5A3-201ENST00000264828 TFPTP0C1Z6 253 aa17.46■□□□□ 0.38
COL5A3-201ENST00000264828 AFF1P51825 1210 aaKnown RBP17.46■□□□□ 0.38
COL5A3-201ENST00000264828 NIPAL1Q6NVV3 410 aa17.46■□□□□ 0.38
COL5A3-201ENST00000264828 ERMP1Q7Z2K6 904 aa17.46■□□□□ 0.38
COL5A3-201ENST00000264828 CMTM7Q96FZ5 175 aa17.46■□□□□ 0.38
COL5A3-201ENST00000264828 GAS2L1Q99501 681 aaPredicted RBP17.46■□□□□ 0.38
COL5A3-201ENST00000264828 RPF2Q9H7B2 306 aaKnown RBP17.46■□□□□ 0.38
COL5A3-201ENST00000264828 PREBQ9HCU5 417 aa17.46■□□□□ 0.38
COL5A3-201ENST00000264828 GLDCP23378 1020 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 UQCRC1P31930 480 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 MLLT1Q03111 559 aaPredicted RBP17.45■□□□□ 0.38
COL5A3-201ENST00000264828 ZC3HC1Q86WB0 502 aaKnown RBP17.45■□□□□ 0.38
COL5A3-201ENST00000264828 CENPSQ8N2Z9 138 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 DTX3Q8N9I9 347 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 MAPKAP1Q9BPZ7 522 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 SCDO00767 359 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 RPS3P23396 243 aaKnown RBP eCLIP17.45■□□□□ 0.38
COL5A3-201ENST00000264828 RPS13P62277 151 aaKnown RBP17.45■□□□□ 0.38
COL5A3-201ENST00000264828 SH3D19Q5HYK7 790 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 OR8K3Q8NH51 312 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 XPNPEP1Q9NQW7 623 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 MS4A12Q9NXJ0 267 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 ACTR3BQ9P1U1 418 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 HYKKA2RU49 373 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 VILLO15195 856 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 NUAK1O60285 661 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 MATN1P21941 496 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 ARL3P36405 182 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 TAS2R50P59544 299 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 ZNF404Q494X3 552 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 SLC35F1Q5T1Q4 408 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 TSSK6Q9BXA6 273 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 SERINC1Q9NRX5 453 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 ABCD2Q9UBJ2 740 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 LCN1P31025 176 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 OR1E2P47887 323 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 CLCNKAP51800 687 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 GLIS1Q8NBF1 620 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 USP29Q9HBJ7 922 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 LRRC42Q9Y546 428 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 TEX13DA0A0J9YY54 714 aaPredicted RBP17.45■□□□□ 0.38
COL5A3-201ENST00000264828 A0A1W2PPW3 197 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 RCBTB2O95199 551 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 BMP8BP34820 402 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 MVKQ03426 396 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 PIGFQ07326 219 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 C1orf94Q6P1W5 598 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 TUBA3EQ6PEY2 450 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 BMP8AQ7Z5Y6 402 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 KREMEN2Q8NCW0 462 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 SCGB3A2Q96PL1 93 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 MTMR10Q9NXD2 777 aa17.45■□□□□ 0.38
COL5A3-201ENST00000264828 NID2Q14112 1375 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 MAP2K4P45985 399 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 ZNF267Q14586 743 aaPredicted RBP17.44■□□□□ 0.38
COL5A3-201ENST00000264828 PCLAFQ15004 111 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 FBXL22Q6P050 247 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 RNF130Q86XS8 419 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 HCAR2Q8TDS4 363 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 AUTS2Q8WXX7 1259 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 CCDC86Q9H6F5 360 aaKnown RBP17.44■□□□□ 0.38
COL5A3-201ENST00000264828 TMEM5Q9Y2B1 443 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 RGPD8O14715 1765 aaPredicted RBP17.44■□□□□ 0.38
COL5A3-201ENST00000264828 TUBG1P23258 451 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 C2orf27AQ580R0 203 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 SPANXN4Q5MJ08 99 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 BEND4Q6ZU67 534 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 PVALBP20472 110 aaPredicted RBP17.44■□□□□ 0.38
COL5A3-201ENST00000264828 NPR2P20594 1047 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 TUBA1BP68363 451 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 LRRC37A5PQ49AS3 106 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 MBLAC2Q68D91 279 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 TUBA1AQ71U36 451 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 RAB11FIP2Q7L804 512 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 ZNF565Q8N9K5 539 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 RBM47A0AV96 593 aaKnown RBP17.44■□□□□ 0.38
COL5A3-201ENST00000264828 RPP38P78345 283 aaKnown RBP17.44■□□□□ 0.38
COL5A3-201ENST00000264828 SLC36A4Q6YBV0 504 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 OR5T2Q8NGG2 359 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 EFCAB11Q9BUY7 163 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 MYOCOSA0A1B0GUC4 107 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 A8MU76 341 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 ADAMTS3O15072 1205 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 HLA-DPB1P04440 258 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 PCSK2P16519 638 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 CCL14Q16627 93 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 UAP1L1Q3KQV9 507 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 GPR33Q49SQ1 333 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 SMYD5Q6GMV2 418 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 ZNF773Q6PK81 442 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 AKAP1Q92667 903 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL5A3-201ENST00000264828 OR51B5Q9H339 312 aa17.44■□□□□ 0.38
COL5A3-201ENST00000264828 FAM124BQ9H5Z6 455 aaPredicted RBP17.44■□□□□ 0.38
COL5A3-201ENST00000264828 TIMM8BQ9Y5J9 83 aaPredicted RBP17.44■□□□□ 0.38
COL5A3-201ENST00000264828 HCRTO43612 131 aa17.43■□□□□ 0.38
COL5A3-201ENST00000264828 ABCB7O75027 752 aa17.43■□□□□ 0.38
COL5A3-201ENST00000264828 HTR1AP08908 422 aa17.43■□□□□ 0.38
COL5A3-201ENST00000264828 AOC1P19801 751 aa17.43■□□□□ 0.38
COL5A3-201ENST00000264828 FPR1P21462 350 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms