RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 HIVEP3Q5T1R4 2406 aa11.55□□□□□ -0.56
TRAF4-202ENST00000262396 TEX15Q9BXT5 2789 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 PCM1Q15154 2024 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 UNC79Q9P2D8 2635 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 OR2W5A6NFC9 320 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 GABRR3A8MPY1 467 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 DNALI1O14645 258 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-202ENST00000262396 SNRPB2P08579 225 aaKnown RBP11.54□□□□□ -0.56
TRAF4-202ENST00000262396 ABOP16442 354 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 ALOX12P18054 663 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 TNFRSF8P28908 595 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 ST13P50502 369 aaKnown RBP11.54□□□□□ -0.56
TRAF4-202ENST00000262396 CCZ1BP86790 482 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 CCZ1P86791 482 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-202ENST00000262396 ART3Q13508 389 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 CYP1B1Q16678 543 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 DEFB134Q4QY38 66 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 HP1BP3Q5SSJ5 553 aaPredicted RBP11.54□□□□□ -0.56
TRAF4-202ENST00000262396 RBM20Q5T481 1227 aaKnown RBP11.54□□□□□ -0.56
TRAF4-202ENST00000262396 RNASEH2BQ5TBB1 312 aaKnown RBP11.54□□□□□ -0.56
TRAF4-202ENST00000262396 FAM45BPQ6NSW5 357 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 CRLF3Q8IUI8 442 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 SPNS2Q8IVW8 549 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 MCEMP1Q8IX19 187 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 SLC35F6Q8N357 371 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 FAM45AQ8TCE6 357 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 CCT6BQ92526 530 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 TBC1D20Q96BZ9 403 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 CERS2Q96G23 380 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 FAR2Q96K12 515 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 PTCHD1Q96NR3 888 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 AIF1LQ9BQI0 150 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 CDCP1Q9H5V8 836 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 CHST11Q9NPF2 352 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 MED16Q9Y2X0 877 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 CREBBPQ92793 2442 aa11.54□□□□□ -0.56
TRAF4-202ENST00000262396 TRBC2A0A5B9 178 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 MAGEB17A8MXT2 336 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 NPIPA5E9PKD4 350 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 FCHO1O14526 889 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 LCMT2O60294 686 aaKnown RBP11.53□□□□□ -0.56
TRAF4-202ENST00000262396 PRMT3O60678 531 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 SLC19A2O60779 497 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 H2AFYO75367 372 aaKnown RBP11.53□□□□□ -0.56
TRAF4-202ENST00000262396 FHP07954 510 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 ZNF888P0CJ79 500 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-202ENST00000262396 MST1P26927 711 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 HTR1EP28566 365 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 TDGF1P3P51864 188 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 SLC12A2P55011 1212 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 CDKN2DP55273 166 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 OLR1P78380 273 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 PWP1Q13610 501 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 TUBA3CQ13748 450 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 PHKG1Q16816 387 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 KRTCAP3Q53RY4 240 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 HECTD2Q5U5R9 776 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 ZNF324BQ6AW86 544 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-202ENST00000262396 SPINK14Q6IE38 97 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 TUBA3EQ6PEY2 450 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 TMPRSS11BQ86T26 416 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 EID3Q8N140 333 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 ZNF808Q8N4W9 903 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-202ENST00000262396 TRPV3Q8NET8 790 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 OR5T3Q8NGG3 340 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 ACTRT1Q8TDG2 376 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 SLC5A11Q8WWX8 675 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 TSLPQ969D9 159 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 CCDC120Q96HB5 630 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 VPS39Q96JC1 886 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 TSNARE1Q96NA8 513 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 PHF12Q96QT6 1004 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 SGPP1Q9BX95 441 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 UNKQ9C0B0 810 aaKnown RBP11.53□□□□□ -0.56
TRAF4-202ENST00000262396 TSPAN10Q9H1Z9 355 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-202ENST00000262396 GPAMQ9HCL2 828 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 MMP25Q9NPA2 562 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 ZFATQ9P243 1243 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 LRFN1Q9P244 771 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 CORO1CQ9ULV4 474 aaPredicted RBP11.53□□□□□ -0.56
TRAF4-202ENST00000262396 NPIPA1Q9UND3 350 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 CHMP2BQ9UQN3 213 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 VWA7Q9Y334 891 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 DOPEY1Q5JWR5 2465 aa11.53□□□□□ -0.56
TRAF4-202ENST00000262396 DOCK10Q96BY6 2186 aa11.52□□□□□ -0.56
TRAF4-202ENST00000262396 SVILO95425 2214 aa11.52□□□□□ -0.56
TRAF4-202ENST00000262396 A8MUA0 341 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 CHST10O43529 356 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 BANF1O75531 89 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 AHSGP02765 367 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 ENO2P09104 434 aaPredicted RBP11.52□□□□□ -0.57
TRAF4-202ENST00000262396 NPPBP16860 134 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 CD96P40200 585 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 CA7P43166 264 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 MAGEA3P43357 314 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 ARL4CP56559 192 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 SLC26A5P58743 744 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 RAB8AP61006 207 aa11.52□□□□□ -0.57
TRAF4-202ENST00000262396 USP10Q14694 798 aaKnown RBP11.52□□□□□ -0.57
TRAF4-202ENST00000262396 CATSPEREQ5SY80 951 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms