RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 BPHLQ86WA6 291 aaPredicted RBP19.76■□□□□ 0.75
RTCA-201ENST00000260563 MCATQ8IVS2 390 aaKnown RBP19.76■□□□□ 0.75
RTCA-201ENST00000260563 DDIASQ8IXT1 998 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 CCDC197Q8NCU1 140 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 USP7Q93009 1102 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 NXPE2Q96DL1 559 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 TAAR9Q96RI9 348 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 CCT7Q99832 543 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 CTRCQ99895 268 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 SARGQ9BW04 601 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 ELOVL6Q9H5J4 265 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 ARL2BPQ9Y2Y0 163 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 CACNA1AO00555 2505 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 OR1F1O43749 312 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 ULK1O75385 1050 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 TNFSF15O95150 251 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 FGF5P12034 268 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 BCL6P41182 706 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 VSX2P58304 361 aaPredicted RBP19.76■□□□□ 0.75
RTCA-201ENST00000260563 ABRAXAS2Q15018 415 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 TMEM164Q5U3C3 297 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 MED27Q6P2C8 311 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 ERMP1Q7Z2K6 904 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 GPR135Q8IZ08 494 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 CACNA2D3Q8IZS8 1091 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 ZNF740Q8NDX6 193 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 OR1L3Q8NH93 324 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 CCT6BQ92526 530 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 THAP11Q96EK4 314 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 TEFMQ96QE5 360 aaKnown RBP19.76■□□□□ 0.75
RTCA-201ENST00000260563 OR2A5Q96R48 311 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 DDA1Q9BW61 102 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 PITHD1Q9GZP4 211 aaPredicted RBP19.76■□□□□ 0.75
RTCA-201ENST00000260563 PFDN4Q9NQP4 134 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 SERTAD3Q9UJW9 196 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 ZNF490Q9ULM2 529 aaPredicted RBP19.76■□□□□ 0.75
RTCA-201ENST00000260563 MSRB2Q9Y3D2 182 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 PCDHGA4Q9Y5G9 962 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 PCDHGA11Q9Y5H2 935 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 PTGDR2Q9Y5Y4 395 aa19.76■□□□□ 0.75
RTCA-201ENST00000260563 SDHDO14521 159 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 SRPX2O60687 465 aaPredicted RBP19.75■□□□□ 0.75
RTCA-201ENST00000260563 OR2B3O76000 313 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 LINC00032P0C843 101 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 RBMS1P29558 406 aaKnown RBP19.75■□□□□ 0.75
RTCA-201ENST00000260563 IFT88Q13099 833 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 RBBP5Q15291 538 aaKnown RBP19.75■□□□□ 0.75
RTCA-201ENST00000260563 TCTE1Q5JU00 501 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 FRG2Q64ET8 278 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 SCIMPQ6UWF3 145 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 TMIGD1Q6UXZ0 262 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 MFSD9Q8NBP5 474 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 SELENOMQ8WWX9 145 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 STON2Q8WXE9 905 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 UBE2E3Q969T4 207 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 PMEPA1Q969W9 287 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 REPS1Q96D71 796 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 MAELQ96JY0 434 aaKnown RBP19.75■□□□□ 0.75
RTCA-201ENST00000260563 FRG2BQ96QU4 278 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 ZPBPQ9BS86 351 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 ASPSCR1Q9BZE9 553 aa19.75■□□□□ 0.75
RTCA-201ENST00000260563 WDR55Q9H6Y2 383 aaPredicted RBP19.75■□□□□ 0.75
RTCA-201ENST00000260563 FARSBQ9NSD9 589 aaKnown RBP19.75■□□□□ 0.75
RTCA-201ENST00000260563 LOC105369274A0A096LPK9 316 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 LOC102723532A0A0G2JNH3 316 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 GOLGA8QA0A0J9YX86 632 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 GOLGA8OA6NCC3 632 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 GOLGA8NF8WBI6 632 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 H0YGG7 62 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 RRP9O43818 475 aaKnown RBP19.74■□□□□ 0.75
RTCA-201ENST00000260563 LCMT2O60294 686 aaKnown RBP19.74■□□□□ 0.75
RTCA-201ENST00000260563 PDYNP01213 254 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 EPHA3P29320 983 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 SCTRP47872 440 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 ARF3P61204 181 aaPredicted RBP19.74■□□□□ 0.75
RTCA-201ENST00000260563 RTP5Q14D33 572 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 SGO1Q5FBB7 561 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 ACAD11Q709F0 780 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 LAS2Q8IYD9 372 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 OR4N4Q8N0Y3 316 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 ZNF655Q8N720 491 aaPredicted RBP19.74■□□□□ 0.75
RTCA-201ENST00000260563 ANKS4BQ8N8V4 417 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 WDR20Q8TBZ3 569 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 MTFMTQ96DP5 389 aaKnown RBP19.74■□□□□ 0.75
RTCA-201ENST00000260563 C3orf30Q96M34 536 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 RILPQ96NA2 401 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 SYNPO2LQ9H987 977 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 B3GALT1Q9Y5Z6 326 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 AK5Q9Y6K8 562 aa19.74■□□□□ 0.75
RTCA-201ENST00000260563 SDK2Q58EX2 2172 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 ZSCAN9O15535 394 aaPredicted RBP19.73■□□□□ 0.75
RTCA-201ENST00000260563 EIF2S1P05198 315 aaKnown RBP19.73■□□□□ 0.75
RTCA-201ENST00000260563 PCNAP12004 261 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 AHRP35869 848 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 NEK2P51955 445 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 ZNF33BQ06732 778 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.73■□□□□ 0.75
RTCA-201ENST00000260563 XKR7Q5GH72 579 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 IGF2-ASQ6U949 168 aa19.73■□□□□ 0.75
RTCA-201ENST00000260563 ASPGQ86U10 573 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms