RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 KPNB1Q14974 876 aaKnown RBP16.73■□□□□ 0.27
SRSF1-201ENST00000258962 TLR1Q15399 786 aa16.73■□□□□ 0.27
SRSF1-201ENST00000258962 ICE2Q659A1 982 aa16.73■□□□□ 0.27
SRSF1-201ENST00000258962 DHRS13Q6UX07 377 aa16.73■□□□□ 0.27
SRSF1-201ENST00000258962 VN1R5Q7Z5H4 357 aa16.73■□□□□ 0.27
SRSF1-201ENST00000258962 PACS2Q86VP3 889 aa16.73■□□□□ 0.27
SRSF1-201ENST00000258962 ARL10Q8N8L6 244 aa16.73■□□□□ 0.27
SRSF1-201ENST00000258962 ABHD11Q8NFV4 315 aa16.73■□□□□ 0.27
SRSF1-201ENST00000258962 C11orf24Q96F05 449 aaPredicted RBP16.73■□□□□ 0.27
SRSF1-201ENST00000258962 ABCG4Q9H172 646 aa16.73■□□□□ 0.27
SRSF1-201ENST00000258962 PADI4Q9UM07 663 aa16.73■□□□□ 0.27
SRSF1-201ENST00000258962 TSC22D4Q9Y3Q8 395 aa16.73■□□□□ 0.27
SRSF1-201ENST00000258962 TRBV23OR9-2A0A075B6M9 112 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 FXYD1O00168 92 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 FOXE1O00358 373 aaPredicted RBP16.72■□□□□ 0.27
SRSF1-201ENST00000258962 CFLARO15519 480 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 EEDO75530 441 aaKnown RBP16.72■□□□□ 0.27
SRSF1-201ENST00000258962 PRPS2P11908 318 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 NDUFS1P28331 727 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 SHC2P98077 582 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 REEP5Q00765 189 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 HIST2H2ACQ16777 129 aaPredicted RBP16.72■□□□□ 0.27
SRSF1-201ENST00000258962 TIGD2Q4W5G0 525 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 PIGGQ5H8A4 983 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 C10orf62Q5T681 223 aaPredicted RBP16.72■□□□□ 0.27
SRSF1-201ENST00000258962 HIST2H2AA3Q6FI13 130 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 NOXRED1Q6NXP6 359 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 TMIGD1Q6UXZ0 262 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 NET1Q7Z628 596 aaPredicted RBP16.72■□□□□ 0.27
SRSF1-201ENST00000258962 HPS6Q86YV9 775 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 SLC35F3Q8IY50 421 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 GALNT15Q8N3T1 639 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 FBXW8Q8N3Y1 598 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 KRTCAP2Q8N6L1 136 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 PCYOX1LQ8NBM8 494 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 OR4K1Q8NGD4 311 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 CLHC1Q8NHS4 586 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 NAT6Q93015 286 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 ROPN1LQ96C74 230 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 CXorf40BQ96DE9 158 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 CDRT15Q96T59 188 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 SERPINI1Q99574 410 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 SCNM1Q9BWG6 230 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 SPHK1Q9NYA1 384 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 TAAR2Q9P1P5 351 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 PACSIN3Q9UKS6 424 aa16.72■□□□□ 0.27
SRSF1-201ENST00000258962 IGKV1-8A0A0C4DH67 115 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 LY6G6EA0A0G2JKS1 128 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 CCDC154A6NI56 674 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 ENTPD5O75356 428 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 SH3BGRLO75368 114 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 GP1BAP07359 652 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 MAPK1P28482 360 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 DGKQP52824 942 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 RAE1P78406 368 aaKnown RBP16.71■□□□□ 0.27
SRSF1-201ENST00000258962 PRDX1Q06830 199 aaKnown RBP16.71■□□□□ 0.27
SRSF1-201ENST00000258962 CEACAM7Q14002 265 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 PAGE3Q5JUK9 113 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 IYDQ6PHW0 289 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 RIPOR1Q6ZS17 1223 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 KRT78Q8N1N4 520 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 IFI44Q8TCB0 444 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 CHTF18Q8WVB6 975 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 PATE1Q8WXA2 126 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 METTL2AQ96IZ6 378 aaKnown RBP16.71■□□□□ 0.27
SRSF1-201ENST00000258962 GPATCH1Q9BRR8 931 aaKnown RBP16.71■□□□□ 0.27
SRSF1-201ENST00000258962 SLC39A3Q9BRY0 314 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 EBPLQ9BY08 206 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 DPY30Q9C005 99 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 CROTQ9UKG9 612 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 PCDHB11Q9Y5F2 797 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 U3KQA8 63 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 KNTC1P50748 2209 aa16.71■□□□□ 0.27
SRSF1-201ENST00000258962 EME2A4GXA9 379 aaPredicted RBP16.7■□□□□ 0.26
SRSF1-201ENST00000258962 B4DGG1 531 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 H7BY64 318 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 KDM1AO60341 852 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 SPINK2P20155 84 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 SHMT2P34897 504 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 PIK3CBP42338 1070 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 CCR8P51685 355 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 CLDN8P56748 225 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 CSNK1G2P78368 415 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 SF1Q15637 639 aaKnown RBP16.7■□□□□ 0.26
SRSF1-201ENST00000258962 TRMT5Q32P41 509 aaKnown RBP16.7■□□□□ 0.26
SRSF1-201ENST00000258962 GUSBP11Q6P575 273 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 SFTPA2Q8IWL1 248 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.7■□□□□ 0.26
SRSF1-201ENST00000258962 C1orf52Q8N6N3 182 aaKnown RBP16.7■□□□□ 0.26
SRSF1-201ENST00000258962 ANKRD53Q8N9V6 530 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 OR6C4Q8NGE1 309 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 UBE2E3Q969T4 207 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 PRAP1Q96NZ9 151 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 TSSK3Q96PN8 268 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 AIF1LQ9BQI0 150 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 TWSG1Q9GZX9 223 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 CLMPQ9H6B4 373 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 SLC6A20Q9NP91 592 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 BCAP29Q9UHQ4 241 aa16.7■□□□□ 0.26
SRSF1-201ENST00000258962 LEF1Q9UJU2 399 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms