RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 LRRC26Q2I0M4 334 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 NHSL2Q5HYW2 709 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 COLEC12Q5KU26 742 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 HACD4Q5VWC8 232 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ADGRD1Q6QNK2 874 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF687Q8N1G0 1237 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 VWA5B2Q8N398 1253 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 DNAJC22Q8N4W6 341 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 OR1N1Q8NGS0 311 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 LKAAEAR1Q8TD35 194 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 IGSF21Q96ID5 467 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 KLHL5Q96PQ7 755 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ATG101Q9BSB4 218 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 TMEM208Q9BTX3 173 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 DHRS4Q9BTZ2 278 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 MRI1Q9BV20 369 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ADAM33Q9BZ11 813 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 HDHD2Q9H0R4 259 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 FAM83DQ9H4H8 585 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 DYRK4Q9NR20 520 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 WBP1LQ9NX94 342 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 DNPEPQ9ULA0 475 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 OGDHLQ9ULD0 1010 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 SIPA1L3O60292 1781 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 USP6P35125 1406 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 MST1RQ04912 1400 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 NCF1P14598 390 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 TGM2P21980 687 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 S100A7P31151 101 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 RPA3P35244 121 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 PTGER3P43115 390 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 GMPSP49915 693 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 PTENP60484 403 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 PRPS1P60891 318 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 TFCP2Q12800 502 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CTTNQ14247 550 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 MAN2A1Q16706 1144 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 COL28A1Q2UY09 1125 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 RNLSQ5VYX0 342 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 TMEM236Q5W0B7 351 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 GCNT7Q6ZNI0 430 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 LHFPL2Q6ZUX7 228 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 FAM183BPQ6ZVS7 135 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 NDUFAF7Q7L592 441 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 GPR149Q86SP6 731 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CIR1Q86X95 450 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ZFP82Q8N141 532 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 RASGEF1CQ8N431 466 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 EFCAB3Q8N7B9 438 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 SLC30A5Q8TAD4 765 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CD300LFQ8TDQ1 290 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 FBXO32Q969P5 355 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 MED8Q96G25 268 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 NUDT11Q96G61 164 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CELF6Q96J87 481 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 SORT1Q99523 831 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 VAT1Q99536 393 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 P2RX7Q99572 595 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 KATNB1Q9BVA0 655 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 GGACTQ9BVM4 153 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ARHGAP39Q9C0H5 1083 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 OR10A4Q9H209 315 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 COPRSQ9NQ92 184 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 LYARQ9NX58 379 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 SMPD3Q9NY59 655 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 PIM2Q9P1W9 311 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 KIF25Q9UIL4 384 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 SLC6A5Q9Y345 797 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 IRAK3Q9Y616 596 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 WDR81Q562E7 1941 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 H7C4K7 107 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 SURF4O15260 269 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 DDX3YO15523 660 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 LIASO43766 372 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 OR10H3O60404 316 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 AHSA1O95433 338 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 TPOP07202 933 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 PTPN6P29350 595 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 POLR2IP36954 125 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 RARRES1P49788 294 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 FCGRTP55899 365 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 SOWAHCQ53LP3 525 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 AVPI1Q5T686 147 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 RNF219Q5W0B1 726 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 HEATR6Q6AI08 1181 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ZC3H14Q6PJT7 736 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ZNF773Q6PK81 442 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 MOXD1Q6UVY6 613 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 TMEM200AQ86VY9 491 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 METTL13Q8N6R0 699 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 KCTD6Q8NC69 237 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 CAMKVQ8NCB2 501 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 PAPD5Q8NDF8 572 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 OR5D18Q8NGL1 313 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 OR13J1Q8NGT2 312 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 C9orf43Q8TAL5 461 aaPredicted RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 ETNPPLQ8TBG4 499 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 RNASE8Q8TDE3 154 aaKnown RBP7.49□□□□□ -1.21
GPNMB-201ENST00000258733 STK35Q8TDR2 534 aa7.49□□□□□ -1.21
GPNMB-201ENST00000258733 DCAKDQ8WVC6 231 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms