RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 KCNH1O95259 989 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 STATHP02808 62 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 CTSEP14091 401 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 CXCR2P25025 360 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 CD27P26842 260 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 MTPNP58546 118 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 PHEXP78562 749 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 GTDC1Q4AE62 458 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 IYDQ6PHW0 289 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 TAF8Q7Z7C8 310 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 FAM9CQ8IZT9 166 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 TESCQ96BS2 214 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 CNBD2Q96M20 576 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 SLC6A13Q9NSD5 602 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 EGFL7Q9UHF1 273 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 BTN3A3O00478 584 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 CHRM5P08912 532 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-201ENST00000254816 PRPS1L1P21108 318 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 BCKDHBP21953 392 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 NDUFS1P28331 727 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 NUDT1P36639 197 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 RHDQ02161 417 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 DMWDQ09019 674 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 PLCL1Q15111 1095 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 C10orf62Q5T681 223 aaPredicted RBP18.1■□□□□ 0.49
TRIM47-201ENST00000254816 PARGQ86W56 976 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 TMEM126BQ8IUX1 230 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 OR2L3Q8NG85 312 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 METTL2AQ96IZ6 378 aaKnown RBP18.1■□□□□ 0.49
TRIM47-201ENST00000254816 CGREF1Q99674 301 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 INPP5KQ9BT40 448 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 GSDMCQ9BYG8 508 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 RHBGQ9H310 441 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 BTBD3Q9Y2F9 522 aa18.1■□□□□ 0.49
TRIM47-201ENST00000254816 COX7A2P14406 83 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 ATP6V1B2P21281 511 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 SHMT2P34897 504 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 CXCL12P48061 93 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 GPR18Q14330 331 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 KIAA1614Q5VZ46 1190 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 TRIM48Q8IWZ4 208 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 CATSPER1Q8NEC5 780 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 HSPA12BQ96MM6 686 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 TRAPPC9Q96Q05 1148 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 F2RL3Q96RI0 385 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 REXO4Q9GZR2 422 aaKnown RBP18.09■□□□□ 0.49
TRIM47-201ENST00000254816 SRMSQ9H3Y6 488 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 CD320Q9NPF0 282 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 TSC22D4Q9Y3Q8 395 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 ARHGAP10A1A4S6 786 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 RTCAO00442 366 aaKnown RBP18.09■□□□□ 0.49
TRIM47-201ENST00000254816 DENRO43583 198 aaKnown RBP18.09■□□□□ 0.49
TRIM47-201ENST00000254816 KDM1AO60341 852 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 KLHL18O94889 574 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 NPPAP01160 153 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 SERPIND1P05546 499 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 GSNP06396 782 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 KLK1P06870 262 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 JUNDP17535 347 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 EFNA1P20827 205 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-201ENST00000254816 PTX3P26022 381 aaPredicted RBP18.09■□□□□ 0.49
TRIM47-201ENST00000254816 CD38P28907 300 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 GSK3BP49841 420 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 LIPEQ05469 1076 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 TRAP1Q12931 704 aaKnown RBP18.09■□□□□ 0.49
TRIM47-201ENST00000254816 NRF1Q16656 503 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 GPR180Q86V85 440 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 MSRB3Q8IXL7 192 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 TMEFF1Q8IYR6 380 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 ADGRF3Q8IZF5 1079 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 GJD3Q8N144 294 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 METTL4Q8N3J2 472 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 CAMKK1Q8N5S9 505 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 EME1Q96AY2 570 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 DPH7Q9BTV6 452 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 ALG2Q9H553 416 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 SERHLQ9NQF3 203 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 SLC25A37Q9NYZ2 338 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 APOBEC3BQ9UH17 382 aaKnown RBP18.09■□□□□ 0.49
TRIM47-201ENST00000254816 SNX13Q9Y5W8 968 aa18.09■□□□□ 0.49
TRIM47-201ENST00000254816 TCRBV3S1A0A5B6 114 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 K7ESF4 209 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 PIM1P11309 404 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-201ENST00000254816 CDKN2CP42773 168 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 AMIGO2Q86SJ2 522 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 DHFR2Q86XF0 187 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 MARVELD2Q8N4S9 558 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 MACROD1Q9BQ69 325 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 MS4A8Q9BY19 250 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 OR6C2Q9NZP2 312 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 THEGQ9P2T0 379 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.08■□□□□ 0.48
TRIM47-201ENST00000254816 THADAQ6YHU6 1953 aa18.08■□□□□ 0.48
TRIM47-201ENST00000254816 CACNA1IQ9P0X4 2223 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 LAMA1P25391 3075 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 A0A1W2PR77 199 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 PLPP1O14494 284 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 HAT1O14929 419 aa18.07■□□□□ 0.48
TRIM47-201ENST00000254816 VIPP01282 170 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms