RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 SNX4O95219 450 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 ACADVLP49748 655 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 C6orf136Q5SQH8 315 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 PLD6Q8N2A8 252 aaKnown RBP18.35■□□□□ 0.53
PTPRE-201ENST00000254667 TMEM156Q8N614 296 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 STON2Q8WXE9 905 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 KCNH6Q9H252 994 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 PLAGL1Q9UM63 463 aa18.35■□□□□ 0.53
PTPRE-201ENST00000254667 C2orf78A6NCI8 922 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 HEPACAM2A8MVW5 462 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 B4GALT2O60909 372 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 ZNF20P17024 532 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 DUSP3P51452 185 aaPredicted RBP18.34■□□□□ 0.53
PTPRE-201ENST00000254667 CLEC12AQ5QGZ9 265 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 STEAP4Q687X5 459 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 OR8J3Q8NGG0 315 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 OR5T3Q8NGG3 340 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 SCAMP4Q969E2 229 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 PNPLA2Q96AD5 504 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 B3GAT2Q9NPZ5 323 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.34■□□□□ 0.53
PTPRE-201ENST00000254667 PCDHGB5Q9Y5G0 923 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 A0A0X1KG70 313 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 MBLAC1A4D2B0 266 aaPredicted RBP18.34■□□□□ 0.53
PTPRE-201ENST00000254667 CNMDO75829 334 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 OR4K14Q8NGD5 310 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 KCTD7Q96MP8 289 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 CD180Q99467 661 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 CHMP1AQ9HD42 196 aaPredicted RBP18.34■□□□□ 0.53
PTPRE-201ENST00000254667 FANCFQ9NPI8 374 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 KLRF1Q9NZS2 232 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 FAM221BA6H8Z2 402 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 MYADML2A6NDP7 307 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 OR1I1O60431 355 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 CCNKO75909 580 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 CD36P16671 472 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 AAK1Q2M2I8 961 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 MLIPQ5VWP3 458 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 CCDC36Q8IYA8 594 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 SETD7Q8WTS6 366 aaKnown RBP18.34■□□□□ 0.53
PTPRE-201ENST00000254667 OR5P2Q8WZ92 322 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 MED28Q9H204 178 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 HRASLS2Q9NWW9 162 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 FABP12A6NFH5 140 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 WRBO00258 174 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 KAT7O95251 611 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 PLGP00747 810 aaPredicted RBP18.34■□□□□ 0.53
PTPRE-201ENST00000254667 BMPR1AP36894 532 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 DHCR24Q15392 516 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 FBXO46Q6PJ61 603 aaPredicted RBP18.34■□□□□ 0.53
PTPRE-201ENST00000254667 NANOGNBQ7Z5D8 188 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 TMEM126BQ8IUX1 230 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 BBS10Q8TAM1 723 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 C15orf40Q8WUR7 153 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 TNFAIP8L1Q8WVP5 186 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 ALPK1Q96QP1 1244 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 SGIP1Q9BQI5 828 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 PRODH2Q9UF12 536 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 ZNF221Q9UK13 617 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 WDR45Q9Y484 360 aa18.34■□□□□ 0.53
PTPRE-201ENST00000254667 GP1BBP13224 206 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 SLC6A4P31645 630 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 KCNC4Q03721 635 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 FAM189A2Q15884 450 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 NOXRED1Q6NXP6 359 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 NCEH1Q6PIU2 408 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 SATL1Q86VE3 508 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 OR2L5Q8NG80 312 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 ARMC5Q96C12 935 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 ASPNQ9BXN1 380 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 PAK4O96013 591 aaPredicted RBP18.33■□□□□ 0.53
PTPRE-201ENST00000254667 MAP3K8P41279 467 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 SLC10A2Q12908 348 aaPredicted RBP18.33■□□□□ 0.53
PTPRE-201ENST00000254667 ZNF598Q86UK7 904 aaKnown RBP18.33■□□□□ 0.53
PTPRE-201ENST00000254667 BADQ92934 168 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 PAAF1Q9BRP4 392 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 MND1Q9BWT6 205 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 SNTG1Q9NSN8 517 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 NLGN3Q9NZ94 848 aa18.33■□□□□ 0.53
PTPRE-201ENST00000254667 LINGO3P0C6S8 592 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 NR4A1P22736 598 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 CYBRD1Q53TN4 286 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 IDNKQ5T6J7 187 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 ATG9BQ674R7 924 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 ZNF554Q86TJ5 538 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 TRIM74Q86UV6 250 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 ZFAND4Q86XD8 727 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 AURKBQ96GD4 344 aaPredicted RBP18.33■□□□□ 0.52
PTPRE-201ENST00000254667 MARK1Q9P0L2 795 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 IFT52Q9Y366 437 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 FKBP7Q9Y680 259 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 MTRF1O75570 445 aaKnown RBP18.33■□□□□ 0.52
PTPRE-201ENST00000254667 SOX30O94993 753 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 POLR2CP19387 275 aaPredicted RBP18.33■□□□□ 0.52
PTPRE-201ENST00000254667 TSPAN5P62079 268 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 HSF2Q03933 536 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 DMPKQ09013 629 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 RBBP4Q09028 425 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 ARMCX6Q7L4S7 300 aa18.33■□□□□ 0.52
PTPRE-201ENST00000254667 HPS1Q92902 700 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms