RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TXLNGYQ9BZA5 131 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 CD244Q9BZW8 370 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 SLC6A16Q9GZN6 736 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 NT5DC2Q9H857 520 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 GPR83Q9NYM4 423 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 C3orf18Q9UK00 162 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 FBXL4Q9UKA2 621 aa12.11□□□□□ -0.47
VPREB3-201ENST00000248948 URADA6NGE7 173 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 IDSB3KWA1 339 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 UBXN8O00124 270 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 MAP2K7O14733 419 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 CLGNO14967 610 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 KLHL18O94889 574 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 STATHP02808 62 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 SERPINA6P08185 405 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 ACPPP15309 386 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 ALOX12P18054 663 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 IL10P22301 178 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 VARSP26640 1264 aaKnown RBP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 HPDP32754 393 aaPredicted RBP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 GMPRP36959 345 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 KLRB1Q12918 225 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 AIMP2Q13155 320 aaKnown RBP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 SLBPQ14493 270 aaKnown RBP eCLIP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 NAA30Q147X3 362 aaPredicted RBP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 SETDB1Q15047 1291 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 TBCCQ15814 346 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 TSNAXIP1Q2TAA8 658 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 C18orf21Q32NC0 220 aaPredicted RBP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 VWA2Q5GFL6 755 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 TECRLQ5HYJ1 363 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 PAGE2BQ5JRK9 111 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 TEX35Q5T0J7 233 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 VWA5B1Q5TIE3 1220 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 METTL2BQ6P1Q9 378 aaKnown RBP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 TMIGD1Q6UXZ0 262 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 SHISA6Q6ZSJ9 500 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 ASB18Q6ZVZ8 466 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 PRSS41Q7RTY9 318 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 PDSS2Q86YH6 399 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 SNX31Q8N9S9 440 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 ANKRD53Q8N9V6 530 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 LRRN4CLQ8ND94 238 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 ZNF740Q8NDX6 193 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 FDCSPQ8NFU4 85 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 NXNL1Q96CM4 212 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 MTBPQ96DY7 904 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 PTCD3Q96EY7 689 aaKnown RBP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 OR1F2PQ96R84 312 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 CLK4Q9HAZ1 481 aaKnown RBP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 ZNF71Q9NQZ8 489 aaPredicted RBP12.1□□□□□ -0.47
VPREB3-201ENST00000248948 NAALAD2Q9Y3Q0 740 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 ZNF451Q9Y4E5 1061 aa12.1□□□□□ -0.47
VPREB3-201ENST00000248948 POC1B-GALNT4F8VUJ3 575 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 K7EPI3 171 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 SUV39H1O43463 412 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 KLK8O60259 260 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 CCNT2O60583 730 aaKnown RBP12.09□□□□□ -0.47
VPREB3-201ENST00000248948 GALR3O60755 368 aaPredicted RBP12.09□□□□□ -0.47
VPREB3-201ENST00000248948 H2AFYO75367 372 aaKnown RBP12.09□□□□□ -0.47
VPREB3-201ENST00000248948 RDH16O75452 317 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 BMP10O95393 424 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 HPP00738 406 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 ALPPP05187 535 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 COL6A2P12110 1019 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 MTHFD2P13995 350 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 PLA2G2AP14555 144 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 PIK3CGP48736 1102 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 CCL11P51671 97 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 ALDH18A1P54886 795 aaKnown RBP12.09□□□□□ -0.47
VPREB3-201ENST00000248948 STXBP1P61764 594 aaKnown RBP12.09□□□□□ -0.47
VPREB3-201ENST00000248948 SNRPNP63162 240 aaKnown RBP12.09□□□□□ -0.47
VPREB3-201ENST00000248948 MAT1AQ00266 395 aaKnown RBP12.09□□□□□ -0.47
VPREB3-201ENST00000248948 PCDH1Q08174 1060 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 LAPTM5Q13571 262 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 MYBPC3Q14896 1274 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 LGSNQ5TDP6 509 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 KIRREL2Q6UWL6 708 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 ATG14Q6ZNE5 492 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 PRICKLE2Q7Z3G6 844 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 LCA5Q86VQ0 697 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 TMEM151BQ8IW70 566 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 GALNT16Q8N428 558 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 OR11G2Q8NGC1 345 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 OR51Q1Q8NH59 317 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 GAL3ST3Q96A11 431 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 MOCOSQ96EN8 888 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 GPR78Q96P69 363 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 SMAD5Q99717 465 aaKnown RBP12.09□□□□□ -0.47
VPREB3-201ENST00000248948 MACROD1Q9BQ69 325 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 NUDT9Q9BW91 350 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 VPS11Q9H270 941 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 ATP13A2Q9NQ11 1180 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 C5AR2Q9P296 337 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 OPTCQ9UBM4 332 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 TMCO1Q9UM00 188 aa12.09□□□□□ -0.47
VPREB3-201ENST00000248948 SCN2AQ99250 2005 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 LOC102723996A0A087X1L8 192 aa12.08□□□□□ -0.48
VPREB3-201ENST00000248948 TRIM49D1C9J1S8 452 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms