RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TMTC4Q5T4D3 741 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 GLYATQ6IB77 296 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 SULT1C3Q6IMI6 304 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 BORAQ6PGQ7 559 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 ZNF548Q8NEK5 533 aaPredicted RBP16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 PRSS33Q8NF86 280 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 PPP3R2Q96LZ3 170 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 FERD3LQ96RJ6 166 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 CGREF1Q99674 301 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 SLC12A9Q9BXP2 914 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 GSDMCQ9BYG8 508 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 CLK4Q9HAZ1 481 aaKnown RBP16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 PARVBQ9HBI1 364 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 FAM86C1Q9NVL1 165 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 OPTCQ9UBM4 332 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 NEUROG3Q9Y4Z2 214 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 PCDHB3Q9Y5E6 796 aa16.31■□□□□ 0.2
CDKN1A-201ENST00000244741 EIF3FO00303 357 aaPredicted RBP16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 EI24O14681 340 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 PSIP1O75475 530 aaKnown RBP16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 C8GP07360 202 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 MYF6P23409 242 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 MAP4P27816 1152 aaKnown RBP16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 ALDH3B2P48448 385 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 HMGCS1Q01581 520 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 PWP1Q13610 501 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 PTGR1Q14914 329 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 SLC36A3Q495N2 470 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 NEK10Q6ZWH5 1172 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 IL17FQ96PD4 163 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 CHID1Q9BWS9 393 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 GMEB2Q9UKD1 530 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 DOLKQ9UPQ8 538 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 YY2O15391 372 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 HNRNPKP61978 463 aaKnown RBP eCLIP16.3■□□□□ 0.23e-12■□□□□ 10.9
CDKN1A-201ENST00000244741 KRT33BQ14525 404 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 RPE65Q16518 533 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 DUOXA1Q1HG43 343 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 HLA-BQ31612 363 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 SGO1Q5FBB7 561 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 GATAD2AQ86YP4 633 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 DTWD1Q8N5C7 304 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 PKP4Q99569 1192 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 ELF4Q99607 663 aaPredicted RBP16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 GTPBP2Q9BX10 602 aaKnown RBP16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 ATG10Q9H0Y0 220 aa16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 ZNF624Q9P2J8 865 aaPredicted RBP16.3■□□□□ 0.2
CDKN1A-201ENST00000244741 EP300Q09472 2414 aaPredicted RBP16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 K7EPI3 171 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 AQP9O43315 295 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 RGS14O43566 566 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 DFNA5O60443 496 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 LDLRP01130 860 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 HIST1H2AGP0C0S8 130 aaPredicted RBP16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 HIST1H2ADP20671 130 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 CYP2A7P20853 494 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 MPLP40238 635 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 TSTA3Q13630 321 aaPredicted RBP16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 SHBQ15464 509 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 ZXDCQ2QGD7 858 aaPredicted RBP16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 ZC3H14Q6PJT7 736 aaKnown RBP16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 RIMKLAQ8IXN7 391 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 CHCHD4Q8N4Q1 142 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 MCOLN3Q8TDD5 553 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 UBTD2Q8WUN7 234 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 CYGBQ8WWM9 190 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 PYCR2Q96C36 320 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 HIST1H2AHQ96KK5 128 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 NSMCE2Q96MF7 247 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 RNF145Q96MT1 663 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 HIST1H2AJQ99878 128 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 H2AFJQ9BTM1 129 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 RAB23Q9ULC3 237 aa16.29■□□□□ 0.2
CDKN1A-201ENST00000244741 KLHL33A6NCF5 533 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 A6NCN8 305 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 PIAS2O75928 621 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 CLIC3O95833 236 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 CATP04040 527 aaKnown RBP16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 F3P13726 295 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 CDH2P19022 906 aaPredicted RBP16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 MAP7Q14244 749 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 ELOCQ15369 112 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 PEAR1Q5VY43 1037 aaPredicted RBP16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 TBPL2Q6SJ96 375 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 ZNF761Q86XN6 746 aaPredicted RBP16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 NAGSQ8N159 534 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 ZNF786Q8N393 782 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 FBXL20Q96IG2 436 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 XKR8Q9H6D3 395 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 GAREM1Q9H706 876 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 VAPAQ9P0L0 249 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 SPASTQ9UBP0 616 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 MAGEL2Q9UJ55 1249 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 ZNF490Q9ULM2 529 aaPredicted RBP16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 EIF3LQ9Y262 564 aaKnown RBP16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 SLC28A1O00337 649 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 MANBAO00462 879 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 KCNJ13O60928 360 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 ULK1O75385 1050 aa16.28■□□□□ 0.2
CDKN1A-201ENST00000244741 SLC16A8O95907 504 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms