RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CCDC177Q9NQR7 707 aaPredicted RBP15.54■□□□□ 0.08
UBE3D-201ENST00000237186 OBP2AQ9NY56 170 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 SH3BP4Q9P0V3 963 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 BAG5Q9UL15 447 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 JRKO75564 520 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 KLHL18O94889 574 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 MYOGP15173 224 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 CRYBA2P53672 197 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 CXCR4P61073 352 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 GAB1Q13480 694 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 DCTN2Q13561 401 aaKnown RBP15.54■□□□□ 0.08
UBE3D-201ENST00000237186 ELOAQ14241 798 aaKnown RBP15.54■□□□□ 0.08
UBE3D-201ENST00000237186 STARD3Q14849 445 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 ZNF385BQ569K4 471 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 LCTLQ6UWM7 567 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 VTCN1Q7Z7D3 282 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 SETD9Q8NE22 299 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 RAD51AP1Q96B01 352 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 ZFYVE19Q96K21 471 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 TRPV4Q9HBA0 871 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 DYRK4Q9NR20 520 aa15.54■□□□□ 0.08
UBE3D-201ENST00000237186 TMEM229AB2RXF0 380 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 E9PQ18 207 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 BCKDKO14874 412 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 SH3BGRLO75368 114 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 HTR1AP08908 422 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 FURINP09958 794 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 NUDT7P0C024 238 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 RXRGP48443 463 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 EMP3P54852 163 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 RBBP4Q09028 425 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 CDK5R2Q13319 367 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 NFE2L1Q14494 772 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 PDGFRLQ15198 375 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 FAM71E1Q6IPT2 247 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 DSG4Q86SJ6 1040 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 C11orf65Q8NCR3 313 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 BARD1Q99728 777 aaKnown RBP15.53■□□□□ 0.08
UBE3D-201ENST00000237186 FANCEQ9HB96 536 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 GPATCH2Q9NW75 528 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 PADI2Q9Y2J8 665 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 PCDHGB1Q9Y5G3 927 aa15.53■□□□□ 0.08
UBE3D-201ENST00000237186 SLC1A7O00341 560 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 PLK4O00444 970 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 GPR37L1O60883 481 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 TNFRSF21O75509 655 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 GCM2O75603 506 aaPredicted RBP15.52■□□□□ 0.08
UBE3D-201ENST00000237186 FKBP9O95302 570 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 ERGP11308 486 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 MATN1P21941 496 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 KELP23276 732 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 PTX3P26022 381 aaPredicted RBP15.52■□□□□ 0.08
UBE3D-201ENST00000237186 HBA1P69905 142 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 KCNJ10P78508 379 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 HPCAP84074 193 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 FAM83HQ6ZRV2 1179 aaPredicted RBP15.52■□□□□ 0.08
UBE3D-201ENST00000237186 PDZD3Q86UT5 571 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 FAM129CQ86XR2 697 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 NAGSQ8N159 534 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 C12orf76Q8N812 135 aaPredicted RBP15.52■□□□□ 0.08
UBE3D-201ENST00000237186 OR52N2Q8NGI0 321 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 OR4A15Q8NGL6 344 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 CXorf40AQ8TE69 158 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 C16orf78Q8WTQ4 265 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 EPYCQ99645 322 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 DOHHQ9BU89 302 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 ADPRHL2Q9NX46 363 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 FAF1Q9UNN5 650 aaPredicted RBP15.52■□□□□ 0.08
UBE3D-201ENST00000237186 DNMT3AQ9Y6K1 912 aaPredicted RBP15.52■□□□□ 0.08
UBE3D-201ENST00000237186 MYO7AQ13402 2215 aa15.52■□□□□ 0.08
UBE3D-201ENST00000237186 C1QTNF3-AMACRE9PGA6 284 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 SUV39H1O43463 412 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 MITFO75030 526 aaPredicted RBP15.52■□□□□ 0.07
UBE3D-201ENST00000237186 TGFB1P01137 390 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 ITIH1P19827 911 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 EFNA1P20827 205 aaPredicted RBP15.52■□□□□ 0.07
UBE3D-201ENST00000237186 P2RY2P41231 377 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 PHEXP78562 749 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 RAPSNQ13702 412 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 ARHGAP19Q14CB8 494 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 FAHD1Q6P587 224 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 TMC5Q6UXY8 1006 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 IKBIPQ70UQ0 350 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 HORMAD1Q86X24 394 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 WDR48Q8TAF3 677 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 SUSD6Q92537 303 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 FGF13Q92913 245 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 SPNS1Q9H2V7 528 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 OR51B5Q9H339 312 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 OCEL1Q9H607 264 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 TMEM38AQ9H6F2 299 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 REEP1Q9H902 201 aa15.52■□□□□ 0.07
UBE3D-201ENST00000237186 PDP1Q9P0J1 537 aaPredicted RBP15.52■□□□□ 0.07
UBE3D-201ENST00000237186 THAP10Q9P2Z0 257 aaPredicted RBP15.52■□□□□ 0.07
UBE3D-201ENST00000237186 NDRG4Q9ULP0 352 aaKnown RBP15.52■□□□□ 0.07
UBE3D-201ENST00000237186 SAMHD1Q9Y3Z3 626 aaKnown RBP15.52■□□□□ 0.07
UBE3D-201ENST00000237186 GRXCR1A8MXD5 290 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 hCG_2039718K7EN88 272 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 JUNDP17535 347 aa15.51■□□□□ 0.07
UBE3D-201ENST00000237186 AGXTP21549 392 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms