RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ANKRD26Q9UPS8 1709 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 A8MV72 311 aaPredicted RBP7.98□□□□□ -1.13
APOB-201ENST00000233242 PRNPP04156 253 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 BMXP51813 675 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 TMED4Q7Z7H5 227 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 COQ10AQ96MF6 247 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 POLE4Q9NR33 117 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 B4GALT5O43286 388 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 EEF1E1O43324 174 aaKnown RBP7.98□□□□□ -1.13
APOB-201ENST00000233242 TRAM2Q15035 370 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 RAB11FIP2Q7L804 512 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 NPAS3Q8IXF0 933 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 SLC15A3Q8IY34 581 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 YIPF7Q8N8F6 280 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 SAV1Q9H4B6 383 aaPredicted RBP7.98□□□□□ -1.13
APOB-201ENST00000233242 ANKMY1Q9P2S6 941 aa7.98□□□□□ -1.13
APOB-201ENST00000233242 TBC1D3BA6NDS4 549 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 H3BMQ9 156 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 WNT9AO14904 365 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 SYN3O14994 580 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 G6PDP11413 515 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 NCBP2P52298 156 aaKnown RBP eCLIP7.97□□□□□ -1.131e-21■■■□□ 16.5
APOB-201ENST00000233242 AKT1S1Q96B36 256 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 PYCR2Q96C36 320 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 COG8Q96MW5 612 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 DPCDQ9BVM2 203 aaPredicted RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 ACOT13Q9NPJ3 140 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 C2orf74A8MZ97 194 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 B3GALT2O43825 422 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 IL1R2P27930 398 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 CD6P30203 668 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 DGKQP52824 942 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 CEACAM7Q14002 265 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 PAFAH1B3Q15102 231 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 CLEC12AQ5QGZ9 265 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ZNF598Q86UK7 904 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 AFDNP55196 1824 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 ALDOAP04075 364 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 EIF2DP41214 584 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 UGT8Q16880 541 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 FBXL18Q96ME1 805 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 STARD7Q9NQZ5 370 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 SOHLH2Q9NX45 425 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 FBXL21Q9UKT6 434 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 CLCA3PQ9Y6N3 262 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 OR12D2P58182 307 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 CCDC54Q8NEL0 328 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 CHPT1Q8WUD6 406 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 NT5DC2Q9H857 520 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ABCB8Q9NUT2 735 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 EXTL2Q9UBQ6 330 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ERVW-1Q9UQF0 538 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 GPSM3Q9Y4H4 160 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 RGS9O75916 674 aaPredicted RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 NCBP2-AS2Q69YL0 99 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 GAB3Q8WWW8 586 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 TFAP2CQ92754 450 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 SLC6A16Q9GZN6 736 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 FN3KQ9H479 309 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ZCCHC3Q9NUD5 404 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 ERVK-18Q9QC07 812 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 EN1Q05925 392 aaPredicted RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 ANKRD54Q6NXT1 300 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 MS4A15Q8N5U1 240 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ZSCAN1Q8NBB4 408 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ZNF436Q9C0F3 470 aaPredicted RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 SYT4Q9H2B2 425 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 RHCEP18577 417 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ALDH3B2P48448 385 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 SPHARQ15513 63 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 NTRK2Q16620 822 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 SLC27A4Q6P1M0 643 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 TAC4Q86UU9 113 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 MYRFLQ96LU7 910 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 OR4K3Q96R72 315 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 TMEM185BQ9H7F4 350 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 APOBEC3GQ9HC16 384 aaKnown RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 SH2B3Q9UQQ2 575 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 NEMP2A6NFY4 417 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 FAM170BA6NMN3 283 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 KCNC3Q14003 757 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ALG10Q5BKT4 473 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 LIPKQ5VXJ0 399 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 BEST3Q8N1M1 668 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 TP63Q9H3D4 680 aaPredicted RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 XPNPEP1Q9NQW7 623 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 DNAJC27Q9NZQ0 273 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 ZNF705EA8MWA4 302 aaPredicted RBP7.97□□□□□ -1.13
APOB-201ENST00000233242 SULT1C2O00338 296 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 RFPL3O75679 317 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 RBBP9O75884 186 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 STC1P52823 247 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 TAF10Q12962 218 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 BLOC1S3Q6QNY0 202 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 HS3ST5Q8IZT8 346 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 PROKR2Q8NFJ6 384 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 CNIH3Q8TBE1 160 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 MOAP1Q96BY2 351 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 LRCH3Q96II8 777 aa7.97□□□□□ -1.13
APOB-201ENST00000233242 C7orf50Q9BRJ6 194 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms