RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ZNF284Q2VY69 593 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 SPDYE7PQ495Y7 208 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 ARTNQ5T4W7 220 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 TSPYL5Q86VY4 417 aaPredicted RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 CHPFQ8IZ52 775 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 KIAA1958Q8N8K9 716 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 ASB15Q8WXK1 588 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 TTC9Q92623 222 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 FBXW5Q969U6 566 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 GTPBP3Q969Y2 492 aaKnown RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 DIRAS2Q96HU8 199 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 FEVQ99581 238 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 C11orf54Q9H0W9 315 aaPredicted RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 MCUBQ9NWR8 336 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 NUDT4Q9NZJ9 180 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 PCDHB5Q9Y5E4 795 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 PCDHGB1Q9Y5G3 927 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 TNPO3Q9Y5L0 923 aaKnown RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 MN1Q10571 1320 aaPredicted RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 MBLAC1A4D2B0 266 aaPredicted RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 TRIM77I1YAP6 450 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 GFRA2O00451 464 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 PRAMEF11O60813 436 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 ITGAMP11215 1152 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 EPB42P16452 691 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 FPR1P21462 350 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 GJA5P36382 358 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 TSTQ16762 297 aaKnown RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 ZNF605Q86T29 641 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 LAX1Q8IWV1 398 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 TRMT61AQ96FX7 289 aaKnown RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 FAM129BQ96TA1 746 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 SDHCQ99643 169 aaPredicted RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 WASH6PQ9NQA3 447 aa13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 BRCA1P38398 1863 aaKnown RBP13.67□□□□□ -0.22
PCDHB3-201ENST00000231130 FAM240BA0A1B0GVZ2 78 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 INSIG1O15503 277 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 PSIP1O75475 530 aaKnown RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 PDYNP01213 254 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 JUNDP17535 347 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 OR1G1P47890 313 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 ELP6Q0PNE2 266 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 FADDQ13158 208 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 FGFBP1Q14512 234 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 GNASQ5JWF2 1037 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 CAPN13Q6MZZ7 669 aaPredicted RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 CPA6Q8N4T0 437 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 APH1BQ8WW43 257 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 OR5M11Q96RB7 305 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 CCDC32Q9BV29 185 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 BRD7Q9NPI1 651 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 RLIMQ9NVW2 624 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 MRPL39Q9NYK5 338 aaKnown RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 RDH8Q9NYR8 311 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 DUSP12Q9UNI6 340 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 F5H5T6 163 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 HAS3O00219 553 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 FPGTO14772 594 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 ITPKAP23677 461 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 RAB14P61106 215 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 TAF1AQ15573 450 aaPredicted RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 INO80DQ53TQ3 878 aaPredicted RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 TEX26Q8N6G2 289 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 SLAIN1Q8ND83 568 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 C19orf18Q8NEA5 215 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 ASB12Q8WXK4 309 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 GGHQ92820 318 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 CPPED1Q9BRF8 314 aaPredicted RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 KATNAL1Q9BW62 490 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 FAM126AQ9BYI3 521 aaPredicted RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 CLMPQ9H6B4 373 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 ASB8Q9H765 288 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 SMURF1Q9HCE7 757 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 TMEM184CQ9NVA4 438 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 NDRG4Q9ULP0 352 aaKnown RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 CFL2Q9Y281 166 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 PCDHGB2Q9Y5G2 931 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 PPP2R3BQ9Y5P8 575 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 ZFP37Q9Y6Q3 630 aaPredicted RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 PRR23AA6NEV1 266 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 ANKRD66B4E2M5 251 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 MANBAO00462 879 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 PLOD3O60568 738 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 CKMT1AP12532 417 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 GKP32189 559 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 KDELR2P33947 212 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 NRIP1P48552 1158 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 CYP4F8P98187 520 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 PROX2Q3B8N5 592 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 ATXN7L2Q5T6C5 722 aaPredicted RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 CXCL17Q6UXB2 119 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 VWA5B2Q8N398 1253 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 APIPQ96GX9 242 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 C1orf74Q96LT6 269 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 DPCDQ9BVM2 203 aaPredicted RBP13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 TTLL2Q9BWV7 592 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 ACPTQ9BZG2 426 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 ARL15Q9NXU5 204 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 NLKQ9UBE8 527 aa13.66□□□□□ -0.22
PCDHB3-201ENST00000231130 ZNF222Q9UK12 451 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms