RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 KIRREL2Q6UWL6 708 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 CCDC91Q7Z6B0 441 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 UBE3DQ7Z6J8 389 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 MRGPREQ86SM8 312 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.01□□□□□ -0.336e-7■■■■■ 40.2
VEGFA-201ENST00000230480 TCAIMQ8N3R3 496 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 OR5T3Q8NGG3 340 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 OR2W6PQ8NHA6 318 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 UTP15Q8TED0 518 aaKnown RBP13.01□□□□□ -0.33
VEGFA-201ENST00000230480 MVB12AQ96EY5 273 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 CATSPER2Q96P56 530 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 SLC7A5P2Q9GIP4 190 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 SOX17Q9H6I2 414 aaPredicted RBP13.01□□□□□ -0.33
VEGFA-201ENST00000230480 NT5DC2Q9H857 520 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 ZBTB26Q9HCK0 441 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 WWOXQ9NZC7 414 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 GPRC5BQ9NZH0 403 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 TLK1Q9UKI8 766 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 POLHQ9Y253 713 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 CLDN16Q9Y5I7 305 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 SLC22A7Q9Y694 548 aa13.01□□□□□ -0.33
VEGFA-201ENST00000230480 ARGFXA6NJG6 315 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 E2F3O00716 465 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 NSA2O95478 260 aaKnown RBP13□□□□□ -0.33
VEGFA-201ENST00000230480 GNAZP19086 355 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 HNRNPH1P31943 449 aaKnown RBP13□□□□□ -0.33
VEGFA-201ENST00000230480 C19orf57Q0VDD7 668 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 PWP1Q13610 501 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 PFKFB4Q16877 469 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 ADPRMQ3LIE5 342 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 WDR93Q6P2C0 686 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 FRA10AC1Q70Z53 315 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 RPS27LQ71UM5 84 aaKnown RBP13□□□□□ -0.33
VEGFA-201ENST00000230480 RNF175Q8N4F7 328 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 ZCCHC10Q8TBK6 192 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 EPS8L3Q8TE67 593 aaKnown RBP13□□□□□ -0.33
VEGFA-201ENST00000230480 APOBEC4Q8WW27 367 aaKnown RBP13□□□□□ -0.33
VEGFA-201ENST00000230480 ABHD17AQ96GS6 310 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 NSUN5Q96P11 429 aaKnown RBP13□□□□□ -0.33
VEGFA-201ENST00000230480 QRFPRQ96P65 431 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 TGIF2Q9GZN2 237 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 DRC3Q9H069 523 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 RHBGQ9H310 441 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 EHD1Q9H4M9 534 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 ACSS2Q9NR19 701 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 LANCL2Q9NS86 450 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 XPR1Q9UBH6 696 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF225Q9UK10 706 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 DYRK1BQ9Y463 629 aa13□□□□□ -0.33
VEGFA-201ENST00000230480 A0A1W2PQ72 361 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 CCDC189A1A4V9 331 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 SUPT3HB4E1H0 165 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 C9J4A7 227 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 GOLGA8RI6L899 631 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 K7EPI3 171 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 OR7A17O14581 309 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 CCNT2O60583 730 aaKnown RBP12.99□□□□□ -0.33
VEGFA-201ENST00000230480 GALR3O60755 368 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-201ENST00000230480 ALOX12BO75342 701 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 SUPT3HO75486 399 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 KRT38O76015 456 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 IPO13O94829 963 aaKnown RBP12.99□□□□□ -0.33
VEGFA-201ENST00000230480 KLHL18O94889 574 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 BMP10O95393 424 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 COL6A2P12110 1019 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 MMP11P24347 488 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 CNTFP26441 200 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 OTX2P32243 289 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 CCR10P46092 362 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 CHIT1Q13231 466 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 RUNX2Q13950 521 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 TBCCQ15814 346 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 FAM83EQ2M2I3 478 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 TAF1BQ53T94 588 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-201ENST00000230480 LRRC70Q7Z2Q7 622 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 TDRPQ86YL5 185 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 PRSS58Q8IYP2 241 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 CAMKVQ8NCB2 501 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 THAP4Q8WY91 577 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 RERGQ96A58 199 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-201ENST00000230480 COL26A1Q96A83 441 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 MMABQ96EY8 250 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-201ENST00000230480 AIF1LQ9BQI0 150 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 PARD6BQ9BYG5 372 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 C12orf65Q9H3J6 166 aaKnown RBP12.99□□□□□ -0.33
VEGFA-201ENST00000230480 P4HTMQ9NXG6 502 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 RAB21Q9UL25 225 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 NAALAD2Q9Y3Q0 740 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 MAP4K5Q9Y4K4 846 aa12.99□□□□□ -0.33
VEGFA-201ENST00000230480 GCN1Q92616 2671 aaKnown RBP12.99□□□□□ -0.33
VEGFA-201ENST00000230480 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
VEGFA-201ENST00000230480 LRIT2A6NDA9 550 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF860A6NHJ4 632 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 H0YIG0 161 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 TXNDC9O14530 226 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 NDUFS4O43181 175 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 RDH16O75452 317 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 SERPINA6P08185 405 aa12.98□□□□□ -0.33
VEGFA-201ENST00000230480 ZNF888P0CJ79 500 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-201ENST00000230480 FBLP22087 321 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms