RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 C11orf65Q8NCR3 313 aa15.67■□□□□ 0.1
LTBR-201ENST00000228918 CHTF18Q8WVB6 975 aa15.67■□□□□ 0.1
LTBR-201ENST00000228918 FCGR1BQ92637 280 aa15.67■□□□□ 0.1
LTBR-201ENST00000228918 KCNC2Q96PR1 638 aa15.67■□□□□ 0.1
LTBR-201ENST00000228918 ITPAQ9BY32 194 aa15.67■□□□□ 0.1
LTBR-201ENST00000228918 EPS8L2Q9H6S3 715 aa15.67■□□□□ 0.1
LTBR-201ENST00000228918 GIN1Q9NXP7 522 aa15.67■□□□□ 0.1
LTBR-201ENST00000228918 ZNF282Q9UDV7 671 aaPredicted RBP15.67■□□□□ 0.1
LTBR-201ENST00000228918 ZNF451Q9Y4E5 1061 aa15.67■□□□□ 0.1
LTBR-201ENST00000228918 LYVE1Q9Y5Y7 322 aa15.67■□□□□ 0.1
LTBR-201ENST00000228918 WASH3PC4AMC7 463 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 TSPAN6O43657 245 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 NTRK1P04629 796 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 TGM1P22735 817 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 IMPA1P29218 277 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 TIA1P31483 386 aaKnown RBP eCLIP15.66■□□□□ 0.1
LTBR-201ENST00000228918 GGT2P36268 569 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 ETV3P41162 512 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 PXNP49023 591 aaPredicted RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 EIF2B2P49770 351 aaKnown RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 HENMT1Q5T8I9 393 aaKnown RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 TMCO2Q7Z6W1 182 aaPredicted RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 PLD3Q8IV08 490 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 P3H2Q8IVL5 708 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 RAVER1Q8IY67 606 aaKnown RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 NAGSQ8N159 534 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 TRAM1L1Q8N609 369 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 OR7G3Q8NG95 312 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 OR2A12Q8NGT7 310 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 OR56A3Q8NH54 315 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 HUS1BQ8NHY5 278 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 C17orf50Q8WW18 174 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 SLC38A4Q969I6 547 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 COPS4Q9BT78 406 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 TMEM184CQ9NVA4 438 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 ATAD3AQ9NVI7 634 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 MGAT4DA6NG13 374 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 EFCAB9A8MZ26 197 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 RNASET2O00584 256 aaKnown RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 PCDH7O60245 1069 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 RFPL2O75678 378 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 VIPP01282 170 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 CATP04040 527 aaKnown RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 ALOX5P09917 674 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 PREPP48147 710 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 GSSP48637 474 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 SELENOWP63302 87 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 ZNF385BQ569K4 471 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 TMEM25Q86YD3 366 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 LILRA3Q8N6C8 439 aaPredicted RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 SLAIN1Q8ND83 568 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 GPR156Q8NFN8 814 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 OR4A15Q8NGL6 344 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 TMEM159Q96B96 161 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 TIFAQ96CG3 184 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 ZNF689Q96CS4 500 aaPredicted RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 ZHX1-C8orf76Q96EF9 292 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 RIOK2Q9BVS4 552 aaKnown RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 SLC46A2Q9BY10 475 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 PLCXD1Q9NUJ7 323 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 SPG21Q9NZD8 308 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 NDUFAF4Q9P032 175 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 PSORS1C1Q9UIG5 152 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 EXO1Q9UQ84 846 aaKnown RBP15.66■□□□□ 0.1
LTBR-201ENST00000228918 TESMINQ9Y4I5 508 aa15.66■□□□□ 0.1
LTBR-201ENST00000228918 TNFRSF11BO00300 401 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 NPC1O15118 1278 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 ADAMDEC1O15204 470 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 TGM5O43548 720 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 CNOT3O75175 753 aaKnown RBP15.65■□□□□ 0.1
LTBR-201ENST00000228918 SLC16A8O95907 504 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 PABPC1P11940 636 aaKnown RBP15.65■□□□□ 0.1
LTBR-201ENST00000228918 LIPAP38571 399 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 MVDP53602 400 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 CTSCP53634 463 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 ELP6Q0PNE2 266 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 NOGQ13253 232 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 TBCEQ15813 527 aaPredicted RBP15.65■□□□□ 0.1
LTBR-201ENST00000228918 KIAA1958Q8N8K9 716 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 SPPL2AQ8TCT8 520 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 FEVQ99581 238 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 PSD2Q9BQI7 771 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 DSN1Q9H410 356 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 ANKHQ9HCJ1 492 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 GPATCH2Q9NW75 528 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 NFKBIL1Q9UBC1 381 aaPredicted RBP15.65■□□□□ 0.1
LTBR-201ENST00000228918 RAPGEFL1Q9UHV5 662 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 CCL26Q9Y258 94 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 TMEM98Q9Y2Y6 226 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 GNG14A0A1W2PPG7 69 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 QSOX1O00391 747 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 LRG1P02750 347 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 OPN1SWP03999 348 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 RPS13P62277 151 aaKnown RBP15.65■□□□□ 0.1
LTBR-201ENST00000228918 FPGSQ05932 587 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 CD300CQ08708 224 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 LRRC74AQ0VAA2 488 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 PPIGQ13427 754 aaKnown RBP eCLIP15.65■□□□□ 0.16e-13■□□□□ 10.7
LTBR-201ENST00000228918 E2F2Q14209 437 aa15.65■□□□□ 0.1
LTBR-201ENST00000228918 PRSS36Q5K4E3 855 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms