RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PPP3CCP48454 512 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 SLC11A1P49279 550 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 HOXC5Q00444 222 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 ADAM15Q13444 863 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 COL28A1Q2UY09 1125 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 VPS26BQ4G0F5 336 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 GPR158Q5T848 1215 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 ALKBH2Q6NS38 261 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 CNSTQ6PJW8 725 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 RRM2BQ7LG56 351 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 BMP8AQ7Z5Y6 402 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 HS3ST5Q8IZT8 346 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 PGBD5Q8N414 524 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 PNPLA1Q8N8W4 532 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 ZNF431Q8TF32 576 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-201ENST00000220429 LRRC58Q96CX6 371 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 MCCC1Q96RQ3 725 aaPredicted RBP13.17□□□□□ -0.3
GABPB1-201ENST00000220429 TLR8Q9NR97 1041 aaKnown RBP13.17□□□□□ -0.3
GABPB1-201ENST00000220429 AASSQ9UDR5 926 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 PCDHB14Q9Y5E9 798 aa13.17□□□□□ -0.3
GABPB1-201ENST00000220429 SCN5AQ14524 2016 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 A0A0J9YYE9 177 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 DRGXA6NNA5 263 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 ARVCFO00192 962 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 AGRPO00253 132 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 SLC16A6O15403 523 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 SELPP16109 830 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 C1QTNF8P60827 252 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 CXCR4P61073 352 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 RPP38P78345 283 aaKnown RBP13.16□□□□□ -0.3
GABPB1-201ENST00000220429 LIPEQ05469 1076 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 NOGQ13253 232 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 GPR17Q13304 367 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 SOWAHCQ53LP3 525 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-201ENST00000220429 RTP2Q5QGT7 225 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 TSTD2Q5T7W7 516 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 MYDGFQ969H8 173 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 FUBP1Q96AE4 644 aaKnown RBP13.16□□□□□ -0.3
GABPB1-201ENST00000220429 ELAC1Q9H777 363 aaKnown RBP13.16□□□□□ -0.3
GABPB1-201ENST00000220429 OLA1Q9NTK5 396 aaKnown RBP13.16□□□□□ -0.3
GABPB1-201ENST00000220429 CUEDC1Q9NWM3 386 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-201ENST00000220429 EDARQ9UNE0 448 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 PQLC2LA1A4F0 135 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 E2F3O00716 465 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 MYL12BO14950 172 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 DLX3O60479 287 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 MRPS14O60783 128 aaKnown RBP13.16□□□□□ -0.3
GABPB1-201ENST00000220429 PSIP1O75475 530 aaKnown RBP13.16□□□□□ -0.3
GABPB1-201ENST00000220429 MYL12AP19105 171 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 RAB25P57735 213 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 NADSYN1Q6IA69 706 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 FUT10Q6P4F1 479 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 TMEM173Q86WV6 379 aaPredicted RBP13.16□□□□□ -0.3
GABPB1-201ENST00000220429 ARRDC2Q8TBH0 407 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 PHOSPHO2Q8TCD6 241 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 TMEM125Q96AQ2 219 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 OMDQ99983 421 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 V9GYH0 126 aa13.16□□□□□ -0.3
GABPB1-201ENST00000220429 hCG_1807616A0A1W2PRN6 198 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 SLC22A23A1A5C7 686 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 SLC30A4O14863 429 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 RAMP2O60895 175 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 GJB3O75712 270 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 PLATP00750 562 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 GRK5P34947 590 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 ACVRL1P37023 503 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 NRIP1P48552 1158 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 CDH13P55290 713 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 RRAS2P62070 204 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-201ENST00000220429 DUSP4Q13115 394 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 FGFBP1Q14512 234 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 ZNF79Q15937 498 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 TCTN1Q2MV58 587 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 GTDC1Q4AE62 458 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 LAIR1Q6GTX8 287 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 PLET1Q6UQ28 207 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 SETD9Q8NE22 299 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 TADA1Q96BN2 335 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 ITCHQ96J02 903 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 SORCS2Q96PQ0 1159 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 COPZ2Q9P299 210 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-201ENST00000220429 PLCL2Q9UPR0 1127 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 ZFR2Q9UPR6 939 aaKnown RBP13.15□□□□□ -0.3
GABPB1-201ENST00000220429 M0R082 166 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 FAM20BO75063 409 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 TULP3O75386 442 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 RECQL5O94762 991 aaPredicted RBP13.15□□□□□ -0.3
GABPB1-201ENST00000220429 SUPT7LO94864 414 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 INHAP05111 366 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 ZDHHC11BP0C7U3 371 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 RAP2AP10114 183 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 GPX3P22352 226 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 POU4F1Q01851 419 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 CREMQ03060 361 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 SERINC3Q13530 473 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 ETFDHQ16134 617 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 RUNDC3AQ59EK9 446 aa13.15□□□□□ -0.3
GABPB1-201ENST00000220429 RABL3Q5HYI8 236 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms