RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PUDPQ08623 228 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 NRROSQ86YC3 692 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 BLOC1S5-TXNDC5H3BN57 136 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 ASGR2P07307 311 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 ASTE1Q2TB18 679 aaPredicted RBP18.34■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF101Q8IZC7 436 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 TOP1MTQ969P6 601 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 GORASP1Q9BQQ3 440 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 POFUT2Q9Y2G5 429 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 FBLP22087 321 aaKnown RBP18.34■□□□□ 0.53
SMPD3-201ENST00000219334 EDNRAP25101 427 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 HNRNPKP61978 463 aaKnown RBP eCLIP18.34■□□□□ 0.53
SMPD3-201ENST00000219334 NR4A3Q92570 626 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 SH3YL1Q96HL8 342 aaPredicted RBP18.34■□□□□ 0.53
SMPD3-201ENST00000219334 TRIM39Q9HCM9 518 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 GOLGA4Q13439 2230 aaKnown RBP18.34■□□□□ 0.53
SMPD3-201ENST00000219334 AXIN1O15169 862 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF763Q0D2J5 394 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 LDLRAD1Q5T700 205 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 ADAMTS10Q9H324 1103 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 DENND2DQ9H6A0 471 aaPredicted RBP18.34■□□□□ 0.53
SMPD3-201ENST00000219334 GRHPRQ9UBQ7 328 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 FTSJ1Q9UET6 329 aa18.34■□□□□ 0.53
SMPD3-201ENST00000219334 C2orf78A6NCI8 922 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF860A6NHJ4 632 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 GRXCR1A8MXD5 290 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 SOX1O00570 391 aaPredicted RBP18.33■□□□□ 0.53
SMPD3-201ENST00000219334 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.53
SMPD3-201ENST00000219334 RPP14O95059 124 aaKnown RBP18.33■□□□□ 0.53
SMPD3-201ENST00000219334 ZNF865P0CJ78 1059 aaPredicted RBP18.33■□□□□ 0.53
SMPD3-201ENST00000219334 AZGP1P25311 298 aaKnown RBP18.33■□□□□ 0.53
SMPD3-201ENST00000219334 EIF1AXP47813 144 aaKnown RBP18.33■□□□□ 0.53
SMPD3-201ENST00000219334 RPS15P62841 145 aaKnown RBP18.33■□□□□ 0.53
SMPD3-201ENST00000219334 POU6F2P78424 691 aaPredicted RBP18.33■□□□□ 0.53
SMPD3-201ENST00000219334 FBXO43Q4G163 708 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 ZDHHC24Q6UX98 284 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 MOAP1Q96BY2 351 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 PARP4Q9UKK3 1724 aaKnown RBP18.33■□□□□ 0.53
SMPD3-201ENST00000219334 KLHL33A6NCF5 533 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 APBB3O95704 486 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 LATS1O95835 1130 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 ETS2P15036 469 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 RBCK1Q9BYM8 510 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 MED28Q9H204 178 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 VRTNQ9H8Y1 702 aa18.33■□□□□ 0.53
SMPD3-201ENST00000219334 E7ENX8 843 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 PRKD3O94806 890 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 SUOXP51687 545 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 NOXRED1Q6NXP6 359 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 ANKRA2Q9H9E1 313 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 ZNF639Q9UID6 485 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 C6orf47O95873 294 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 TIMP1P01033 207 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 CREB1P16220 341 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 PTPRCAPQ14761 206 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 LACTB2Q53H82 288 aaPredicted RBP18.33■□□□□ 0.52
SMPD3-201ENST00000219334 CLIP4Q8N3C7 705 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 THEM6Q8WUY1 208 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 COQ10BQ9H8M1 238 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 POPDC3Q9HBV1 291 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 PAK6Q9NQU5 681 aaPredicted RBP18.33■□□□□ 0.52
SMPD3-201ENST00000219334 GLOD5A6NK44 160 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 DAG1Q14118 895 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 PQLC3Q8N755 202 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 HTRA1Q92743 480 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 DAZLQ92904 295 aaKnown RBP18.33■□□□□ 0.52
SMPD3-201ENST00000219334 IL4I1Q96RQ9 567 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 MEMO1Q9Y316 297 aa18.33■□□□□ 0.52
SMPD3-201ENST00000219334 EME2A4GXA9 379 aaPredicted RBP18.32■□□□□ 0.52
SMPD3-201ENST00000219334 STC2O76061 302 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 PEX2P28328 305 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 OLIG2Q13516 323 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 THOC7Q6I9Y2 204 aaKnown RBP18.32■□□□□ 0.52
SMPD3-201ENST00000219334 OR2T5Q6IEZ7 315 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 UMODL1-AS1Q8N2C9 162 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 FAM86B1Q8N7N1 296 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 C2CD4AQ8NCU7 369 aaPredicted RBP18.32■□□□□ 0.52
SMPD3-201ENST00000219334 OR2T29Q8NH02 315 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 CADM1Q9BY67 442 aaKnown RBP18.32■□□□□ 0.52
SMPD3-201ENST00000219334 PCDHAC1Q9H158 963 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 FBRSQ9HAH7 460 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 PLCL2Q9UPR0 1127 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 E7EQ34 232 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 ITM2AO43736 263 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 RLN2P04090 185 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 VIPR2P41587 438 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 MEF2AQ02078 507 aaPredicted RBP18.32■□□□□ 0.52
SMPD3-201ENST00000219334 CST6Q15828 149 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 EMC10Q5UCC4 262 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 SLC2A7Q6PXP3 512 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 TTC34A8MYJ7 566 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 C5AR1P21730 350 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 GADD45AP24522 165 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 GGT5P36269 586 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 RTP2Q5QGT7 225 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 OR2L8Q8NGY9 312 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 C9orf43Q8TAL5 461 aaPredicted RBP18.32■□□□□ 0.52
SMPD3-201ENST00000219334 RMI1Q9H9A7 625 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 RARRES3Q9UL19 164 aa18.32■□□□□ 0.52
SMPD3-201ENST00000219334 ZFR2Q9UPR6 939 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms