RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 C10orf82Q8WW14 230 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 KCNA7Q96RP8 456 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 OR51B5Q9H339 312 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 VPS29Q9UBQ0 182 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 ZDHHC2Q9UIJ5 367 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 POMPQ9Y244 141 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 TRIP11Q15643 1979 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 PCP4L1A6NKN8 68 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 OR5K4A6NMS3 321 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 NDUFS4O43181 175 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 TYROBPO43914 113 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 TBX10O75333 385 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 CDH1P12830 882 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 FDXRP22570 491 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 NOS3P29474 1203 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 ACSL1P33121 698 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 ACADVLP49748 655 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 PNLIPRP1P54315 467 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 EPHA5P54756 1037 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 SMIM11AP58511 58 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 COPZ1P61923 177 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 PCLAFQ15004 111 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 CBR4Q8N4T8 237 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 RBM18Q96H35 190 aaKnown RBP9.1□□□□□ -0.95
CCDC113-201ENST00000219299 NUSAP1Q9BXS6 441 aaKnown RBP9.1□□□□□ -0.95
CCDC113-201ENST00000219299 CD244Q9BZW8 370 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 MARCH7Q9H992 704 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 PREBQ9HCU5 417 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 TBCCD1Q9NVR7 557 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 GPN3Q9UHW5 284 aaPredicted RBP9.1□□□□□ -0.95
CCDC113-201ENST00000219299 RUVBL1Q9Y265 456 aaKnown RBP9.1□□□□□ -0.95
CCDC113-201ENST00000219299 RNF11Q9Y3C5 154 aa9.1□□□□□ -0.95
CCDC113-201ENST00000219299 AHCTF1Q8WYP5 2266 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 A0A1W2PRG6 482 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 NOS1APO75052 506 aaPredicted RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 FADS2O95864 444 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 OLFM2O95897 454 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 PPIBP23284 216 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 SHMT2P34897 504 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 SCN1BQ07699 218 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 HEPACAMQ14CZ8 416 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 MED22Q15528 200 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 TECRLQ5HYJ1 363 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 ANXA8L1Q5VT79 327 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 PRPF38BQ5VTL8 546 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 ASTLQ6HA08 431 aaPredicted RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 KCTD8Q6ZWB6 473 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 LIX1Q8N485 282 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 SLC5A11Q8WWX8 675 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 PIK3R3Q92569 461 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 NSUN5Q96P11 429 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 UHRF1Q96T88 793 aaPredicted RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 TOR4AQ9NXH8 423 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 PTGFRNQ9P2B2 879 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 TMED5Q9Y3A6 229 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 E7ENX8 843 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 MBTPS2O43462 519 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 C1SP09871 688 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 NR2F1P10589 423 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 MAGP20916 626 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 NT5EP21589 574 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 CD38P28907 300 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 CSNK1EP49674 416 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 SP140Q13342 867 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 SIM2Q14190 667 aaPredicted RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 RUNDC3AQ59EK9 446 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 LYSMD4Q5XG99 296 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 FRMD7Q6ZUT3 714 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 CPSF7Q8N684 471 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 WDR48Q8TAF3 677 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 SLC13A3Q8WWT9 602 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 NELL1Q92832 810 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 PLA2G2FQ9BZM2 168 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 SARDHQ9UL12 918 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 PCDHGA10Q9Y5H3 936 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 PMF1-BGLAPU3KQ54 211 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 OR6C74A6NCV1 312 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 SLC16A8O95907 504 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 IGHA2P01877 340 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 GBAP04062 536 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 NR2F6P10588 404 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 IDH3AP50213 366 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 RPS14P62263 151 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 C6orf89Q6UWU4 347 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 SPPL2CQ8IUH8 684 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 ADI1Q9BV57 179 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 MKRN2Q9H000 416 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 ERN1O75460 977 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 OR6B1O95007 311 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 CPN2P22792 545 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 MMP12P39900 470 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 MLLT3P42568 568 aaPredicted RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 POLR2JP52435 117 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 SLC18A1P54219 525 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 GMFBP60983 142 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 DUS1LQ6P1R4 473 aaKnown RBP9.09□□□□□ -0.95
CCDC113-201ENST00000219299 PAOXQ6QHF9 649 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 PARP8Q8N3A8 854 aa9.09□□□□□ -0.95
CCDC113-201ENST00000219299 TTC29Q8NA56 475 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms