RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 GPC6Q9Y625 555 aaPredicted RBP16.64■□□□□ 0.25
USB1-201ENST00000219281 ABHD14A-ACY1A0A1B0GW23 586 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 HTR3EA5X5Y0 456 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 TEX28O15482 410 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 TBX1O43435 398 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 ANXA4P09525 319 aaPredicted RBP16.63■□□□□ 0.25
USB1-201ENST00000219281 NUDT6P53370 316 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 ANGPTL8Q6UXH0 198 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 DNAJC22Q8N4W6 341 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 SLC5A8Q8N695 610 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 OR52J3Q8NH60 311 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 ECHDC3Q96DC8 303 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 MED8Q96G25 268 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 BRD9Q9H8M2 597 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 SGK2Q9HBY8 427 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 RAD18Q9NS91 495 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 RLIMQ9NVW2 624 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 NDUFAF4Q9P032 175 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 B4GALT6Q9UBX8 382 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 RAPGEFL1Q9UHV5 662 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 BTNL2Q9UIR0 455 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 LSM7Q9UK45 103 aaKnown RBP16.63■□□□□ 0.25
USB1-201ENST00000219281 PPIL1Q9Y3C6 166 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 PLXNB3Q9ULL4 1909 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 CLCA1A8K7I4 914 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 PCDH7O60245 1069 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 LILRB3O75022 631 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 URODP06132 367 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 CDK1P06493 297 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 CSF2RAP15509 400 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 GRK5P34947 590 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 PCGF2P35227 344 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 IDH2P48735 452 aaKnown RBP16.63■□□□□ 0.25
USB1-201ENST00000219281 SEPHS1P49903 392 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 CYP4F8P98187 520 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 TBCEQ15813 527 aaPredicted RBP16.63■□□□□ 0.25
USB1-201ENST00000219281 ZNF648Q5T619 568 aaPredicted RBP16.63■□□□□ 0.25
USB1-201ENST00000219281 LACC1Q8IV20 430 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 NPAS3Q8IXF0 933 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 VPS37AQ8NEZ2 397 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 FOXJ1Q92949 421 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 MCCC1Q96RQ3 725 aaPredicted RBP16.63■□□□□ 0.25
USB1-201ENST00000219281 SPATA9Q9BWV2 254 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 RNF167Q9H6Y7 350 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 PLCXD1Q9NUJ7 323 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 CFAP97Q9P2B7 532 aa16.63■□□□□ 0.25
USB1-201ENST00000219281 LOC100506127A0A0U1RQW1 187 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 AGAP5A6NIR3 686 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 NRG2O14511 850 aaPredicted RBP16.62■□□□□ 0.25
USB1-201ENST00000219281 UGDHO60701 494 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 OR1E2P47887 323 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 C21orf58P58505 322 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 SELENOWP63302 87 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 PPIGQ13427 754 aaKnown RBP eCLIP16.62■□□□□ 0.255e-7■□□□□ 10.1
USB1-201ENST00000219281 NAE1Q13564 534 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 MPPE1Q53F39 396 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 USP43Q70EL4 1123 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 METTL3Q86U44 580 aaKnown RBP16.62■□□□□ 0.25
USB1-201ENST00000219281 GPR156Q8NFN8 814 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 OR10G2Q8NGC3 310 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 OR4A15Q8NGL6 344 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 FIBINQ8TAL6 211 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 ZNF675Q8TD23 568 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 SCAMP4Q969E2 229 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 C11orf24Q96F05 449 aaPredicted RBP16.62■□□□□ 0.25
USB1-201ENST00000219281 GPR83Q9NYM4 423 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 SH3BP4Q9P0V3 963 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 SPASTQ9UBP0 616 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 OR2AG2A6NM03 316 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 DSCR3O14972 297 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 OLFM2O95897 454 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 STSP08842 583 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 CLTBP09497 229 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 HLA-EP13747 358 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 IDSP22304 550 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 HOXD12P35452 270 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 CRATP43155 626 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 EPHB3P54753 998 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 TPTEP56180 551 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 WDR5P61964 334 aaKnown RBP16.62■□□□□ 0.25
USB1-201ENST00000219281 CDC20Q12834 499 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 CARTPTQ16568 116 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 SOWAHCQ53LP3 525 aaPredicted RBP16.62■□□□□ 0.25
USB1-201ENST00000219281 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.62■□□□□ 0.25
USB1-201ENST00000219281 STEAP3Q658P3 488 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 C22orf39Q6P5X5 142 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 SLC46A3Q7Z3Q1 461 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 C11orf65Q8NCR3 313 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 FAM83FQ8NEG4 500 aaPredicted RBP16.62■□□□□ 0.25
USB1-201ENST00000219281 STARD8Q92502 1023 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 SP140LQ9H930 580 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 CORO2BQ9UQ03 480 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 SH3BP1Q9Y3L3 701 aa16.62■□□□□ 0.25
USB1-201ENST00000219281 ISPDA4D126 451 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 TMEM202A6NGA9 273 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ARHGEF33A8MVX0 844 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 TAF4O00268 1085 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 ADAMDEC1O15204 470 aa16.61■□□□□ 0.25
USB1-201ENST00000219281 PPIBP23284 216 aaKnown RBP16.61■□□□□ 0.25
USB1-201ENST00000219281 SPIBQ01892 262 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms