RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 POLR1CO15160 346 aaPredicted RBP25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 TBX6O95947 436 aaPredicted RBP25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 VIMP08670 466 aaKnown RBP25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 TSPAN7P41732 249 aa25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 ID4P47928 161 aa25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 FOXC1Q12948 553 aa25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 PRAMEF17Q5VTA0 474 aa25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 AFAP1L2Q8N4X5 818 aa25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 NLNQ9BYT8 704 aa25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 TUBB1Q9H4B7 451 aa25.98■■□□□ 1.75
CHMP4B-201ENST00000217402 PIP5K1BO14986 540 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 ZSCAN9O15535 394 aaPredicted RBP25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 PWP1Q13610 501 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 TOR1AIP1Q5JTV8 583 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 C10orf62Q5T681 223 aaPredicted RBP25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 CYB5D1Q6P9G0 228 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 PPP1R3BQ86XI6 285 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 ZCCHC10Q8TBK6 192 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 NT5CQ8TCD5 201 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 PPP1R36Q96LQ0 422 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 MS4A8Q9BY19 250 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 OR51B5Q9H339 312 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 FBXO8Q9NRD0 319 aa25.97■■□□□ 1.75
CHMP4B-201ENST00000217402 H3BMH7 237 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 FOXE1O00358 373 aaPredicted RBP25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 ETHE1O95571 254 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 JUNP05412 331 aaKnown RBP25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 SERPINA6P08185 405 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 LINC00032P0C843 101 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 HNRNPH1P31943 449 aaKnown RBP25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 HYAL2Q12891 473 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 IL11RAQ14626 422 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 PRTGQ2VWP7 1150 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 KIRREL3Q8IZU9 778 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 PIWIL2Q8TC59 973 aaKnown RBP25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 CMTM7Q96FZ5 175 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 F2RL3Q96RI0 385 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 KLHL31Q9H511 634 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 PTPRBP23467 1997 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 SAP18O00422 153 aaKnown RBP25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 EDF1O60869 148 aaKnown RBP25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 TIAF1O95411 115 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 GNGT1P63211 74 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 HMGCS1Q01581 520 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 GRM7Q14831 915 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 PWWP2BQ6NUJ5 590 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 TMEM126BQ8IUX1 230 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 TTC29Q8NA56 475 aaPredicted RBP25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 OR8K5Q8NH50 307 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 ACPTQ9BZG2 426 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 SLC6A16Q9GZN6 736 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 AICDAQ9GZX7 198 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 FGFR1OP2Q9NVK5 253 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 SLC12A4Q9UP95 1085 aa25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 MRPS2Q9Y399 296 aaKnown RBP25.96■■□□□ 1.75
CHMP4B-201ENST00000217402 LRIT2A6NDA9 550 aa25.95■■□□□ 1.74
CHMP4B-201ENST00000217402 TXNDC9O14530 226 aa25.95■■□□□ 1.74
CHMP4B-201ENST00000217402 FGF5P12034 268 aa25.95■■□□□ 1.74
CHMP4B-201ENST00000217402 HOXD11P31277 338 aaPredicted RBP25.95■■□□□ 1.74
CHMP4B-201ENST00000217402 SNRPNP63162 240 aaKnown RBP25.95■■□□□ 1.74
CHMP4B-201ENST00000217402 FAR2Q96K12 515 aa25.95■■□□□ 1.74
CHMP4B-201ENST00000217402 NUF2Q9BZD4 464 aa25.95■■□□□ 1.74
CHMP4B-201ENST00000217402 REXO4Q9GZR2 422 aaKnown RBP25.95■■□□□ 1.74
CHMP4B-201ENST00000217402 SPTBN4Q9H254 2564 aa25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 HYKKA2RU49 373 aa25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 SCRG1O75711 98 aa25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 STXBP1P61764 594 aaKnown RBP25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 BTKQ06187 659 aa25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 CSTF3Q12996 717 aaKnown RBP25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 IMPG1Q17R60 797 aa25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 KHDRBS2Q5VWX1 349 aaKnown RBP25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 TLDC1Q6P9B6 456 aa25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 LRRC34Q8IZ02 419 aa25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 BRF2Q9HAW0 419 aa25.94■■□□□ 1.74
CHMP4B-201ENST00000217402 FITM1A5D6W6 292 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 ZNF749O43361 778 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 ZNF888P0CJ79 500 aaPredicted RBP25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 PTX3P26022 381 aaPredicted RBP25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 LSP1P33241 339 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 RAB15P59190 212 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 DCAF12Q5T6F0 453 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 TMEM214Q6NUQ4 689 aaKnown RBP25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 CHSY3Q70JA7 882 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 BPHLQ86WA6 291 aaPredicted RBP25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 GBP7Q8N8V2 638 aaPredicted RBP25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 MS4A6EQ96DS6 147 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 C19orf60Q96EN9 201 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 THOC1Q96FV9 657 aaKnown RBP25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 C10orf90Q96M02 699 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 SERPINI1Q99574 410 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 NDC1Q9BTX1 674 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 B3GALT1Q9Y5Z6 326 aa25.93■■□□□ 1.74
CHMP4B-201ENST00000217402 A0A0G2JN53 185 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 C4orf51C9J302 202 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 ERI3O43414 337 aaKnown RBP25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 MED26O95402 600 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 HSD3B1P14060 373 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 HSD3B2P26439 372 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 PLA2G16P53816 162 aa25.92■■□□□ 1.74
CHMP4B-201ENST00000217402 RAB8AP61006 207 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms