RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 SLC17A6Q9P2U8 582 aa14.17□□□□□ -0.14
UPK3A-201ENST00000216211 NFU1Q9UMS0 254 aa14.17□□□□□ -0.14
UPK3A-201ENST00000216211 DNALI1O14645 258 aaPredicted RBP14.16□□□□□ -0.14
UPK3A-201ENST00000216211 RDH16O75452 317 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 AHSGP02765 367 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 ECHS1P30084 290 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 XCR1P46094 333 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 PGGT1BP53609 377 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 ZNF33BQ06732 778 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 SP140Q13342 867 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 TRADDQ15628 312 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 ZRSR2Q15696 482 aaKnown RBP14.16□□□□□ -0.14
UPK3A-201ENST00000216211 INAQ16352 499 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 BTBD16Q32M84 506 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 MSS51Q4VC12 460 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 ABHD17BQ5VST6 288 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 FCRLBQ6BAA4 426 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 LCTLQ6UWM7 567 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 ASPGQ86U10 573 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 PDSS2Q86YH6 399 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 SLC13A3Q8WWT9 602 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 RBCK1Q9BYM8 510 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 FAM129AQ9BZQ8 928 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 RNF32Q9H0A6 362 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 ANKHQ9HCJ1 492 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 C19orf25Q9UFG5 118 aaPredicted RBP14.16□□□□□ -0.14
UPK3A-201ENST00000216211 ASIC3Q9UHC3 531 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 LRBAP50851 2863 aa14.16□□□□□ -0.14
UPK3A-201ENST00000216211 A0A1B0GUH1 482 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 OR5H15A6NDH6 313 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 A8MUI8 341 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 SLC16A5O15375 505 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 RASAL1O95294 804 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 HIST1H2AGP0C0S8 130 aaPredicted RBP14.15□□□□□ -0.14
UPK3A-201ENST00000216211 NPPBP16860 134 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 HIST1H2ADP20671 130 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 CCND1P24385 295 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 GRK3P35626 688 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 MEF2AQ02078 507 aaPredicted RBP14.15□□□□□ -0.14
UPK3A-201ENST00000216211 BBS9Q3SYG4 887 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 SPANXN3Q5MJ09 141 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 CAPN13Q6MZZ7 669 aaPredicted RBP14.15□□□□□ -0.14
UPK3A-201ENST00000216211 GFRALQ6UXV0 394 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 ANKRD37Q7Z713 158 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 IGDCC3Q8IVU1 814 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 MREGQ8N565 214 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 GABPB2Q8TAK5 448 aaPredicted RBP14.15□□□□□ -0.14
UPK3A-201ENST00000216211 SUN3Q8TAQ9 357 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 PYCR2Q96C36 320 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 HIST1H2AHQ96KK5 128 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 HIST1H2AJQ99878 128 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 H2AFJQ9BTM1 129 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 SGPP1Q9BX95 441 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 STMN3Q9NZ72 180 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 NAALAD2Q9Y3Q0 740 aa14.15□□□□□ -0.14
UPK3A-201ENST00000216211 CSMD1Q96PZ7 3565 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 ZNF860A6NHJ4 632 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 PRAMEF2O60811 474 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 CDC123O75794 336 aaPredicted RBP14.14□□□□□ -0.15
UPK3A-201ENST00000216211 TTC4O95801 387 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 TSPAN12O95859 305 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 CYC1P08574 325 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 SLC35G6P0C7Q6 338 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 MST1P26927 711 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 ST13P50502 369 aaKnown RBP14.14□□□□□ -0.15
UPK3A-201ENST00000216211 PMP22Q01453 160 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 PDAP1Q13442 181 aaKnown RBP14.14□□□□□ -0.15
UPK3A-201ENST00000216211 ZXDCQ2QGD7 858 aaPredicted RBP14.14□□□□□ -0.15
UPK3A-201ENST00000216211 HP1BP3Q5SSJ5 553 aaPredicted RBP14.14□□□□□ -0.15
UPK3A-201ENST00000216211 PLAG1Q6DJT9 500 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 PCGF5Q86SE9 256 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 CNTN4Q8IWV2 1026 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 BEST3Q8N1M1 668 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 GPATCH11Q8N954 259 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 MFSD9Q8NBP5 474 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 MOCOSQ96EN8 888 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 CERS2Q96G23 380 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 PEX11GQ96HA9 241 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 ACBD3Q9H3P7 528 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 PPANQ9NQ55 473 aaKnown RBP14.14□□□□□ -0.15
UPK3A-201ENST00000216211 ARL15Q9NXU5 204 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 TEKT2Q9UIF3 430 aa14.14□□□□□ -0.15
UPK3A-201ENST00000216211 MYO9AB2RTY4 2548 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 PABPN1LA6NDY0 278 aaKnown RBP14.13□□□□□ -0.15
UPK3A-201ENST00000216211 GUCA1CO95843 209 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 FAM153BP0C7A2 387 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 RPL21P46778 160 aaKnown RBP14.13□□□□□ -0.15
UPK3A-201ENST00000216211 AGTR2P50052 363 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 IL2P60568 153 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 FAM153CQ494X1 144 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 SFT2D3Q587I9 215 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 TEDDM1Q5T9Z0 273 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 HECTD2Q5U5R9 776 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 KIAA0408Q6ZU52 694 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 OR5T3Q8NGG3 340 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 OR56A3Q8NH54 315 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 DNAJB8Q8NHS0 232 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 ZNF354BQ96LW1 612 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 PWWP2AQ96N64 755 aa14.13□□□□□ -0.15
UPK3A-201ENST00000216211 OR4K3Q96R72 315 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms