RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 LSSP48449 732 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 RPL38P63173 70 aaKnown RBP10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 DPTQ07507 201 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 MED21Q13503 144 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 ELAVL3Q14576 367 aaKnown RBP10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 LRRC36Q1X8D7 754 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 ZXDCQ2QGD7 858 aaPredicted RBP10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 PTCHD3Q3KNS1 767 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 SYTL3Q4VX76 610 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 DLEU7Q6UYE1 221 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 USP53Q70EK8 1073 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 GRAMD2AQ8IUY3 354 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 SULF2Q8IWU5 870 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 KIAA2013Q8IYS2 634 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 SLC22A15Q8IZD6 547 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 ST13P4Q8IZP2 240 aaPredicted RBP10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 CISD2Q8N5K1 135 aaKnown RBP10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 FBXO15Q8NCQ5 510 aaPredicted RBP10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 DNAJB8Q8NHS0 232 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 FGF13Q92913 245 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 MUL1Q969V5 352 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 P2RY13Q9BPV8 354 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 ZCCHC2Q9C0B9 1178 aaKnown RBP10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 TMEM245Q9H330 911 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 ZNF576Q9H609 170 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 C5AR2Q9P296 337 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 CNOT6Q9ULM6 557 aaKnown RBP10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 AP3M1Q9Y2T2 418 aa10.24□□□□□ -0.77
APOBEC3D-201ENST00000216099 GRXCR1A8MXD5 290 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 MTX2O75431 263 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 PRPS2P11908 318 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 PCNAP12004 261 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 EDN3P14138 238 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 NRIP1P48552 1158 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 CCR9P51686 369 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 HNRNPFP52597 415 aaKnown RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 ATXN3P54252 364 aaPredicted RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 LIPEQ05469 1076 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 TMEM115Q12893 351 aaPredicted RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 AASDHQ4L235 1098 aaPredicted RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 LIPJQ5W064 366 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 NANOGP8Q6NSW7 305 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 MARVELD2Q8N4S9 558 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 VN1R2Q8NFZ6 395 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 OR8J3Q8NGG0 315 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 SKA2Q8WVK7 121 aaPredicted RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 CMTM7Q96FZ5 175 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 SLC45A3Q96JT2 553 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 FCRL1Q96LA6 429 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 KCTD14Q9BQ13 255 aaPredicted RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 OR10A4Q9H209 315 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 NANOGQ9H9S0 305 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 HPS4Q9NQG7 708 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 FARSBQ9NSD9 589 aaKnown RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 PCM1Q15154 2024 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 KANSL1LA0AUZ9 987 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 ARPC2O15144 300 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 KCNH1O95259 989 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 CATP04040 527 aaKnown RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 IL6P05231 212 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 PABPC4LP0CB38 370 aaKnown RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 UMPSP11172 480 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 MAP4P27816 1152 aaKnown RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 PFN3P60673 137 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 CYP4F3Q08477 520 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 ZNF234Q14588 700 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 USP39Q53GS9 565 aaKnown RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 DMRTA1Q5VZB9 504 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 NEK5Q6P3R8 708 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 ARHGAP11AQ6P4F7 1023 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 SLC2A7Q6PXP3 512 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 CYP2R1Q6VVX0 501 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 DSG4Q86SJ6 1040 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 PROSER1Q86XN7 944 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 ZNF366Q8N895 744 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 ANKFN1Q8N957 763 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 TERB1Q8NA31 727 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 TMEM159Q96B96 161 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 NUS1Q96E22 293 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 DACH2Q96NX9 599 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 HBEGFQ99075 208 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 ACPTQ9BZG2 426 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 DPY30Q9C005 99 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 CLMPQ9H6B4 373 aa10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 DDX18Q9NVP1 670 aaKnown RBP10.23□□□□□ -0.77
APOBEC3D-201ENST00000216099 ZNF839A8K0R7 811 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 ARHGEF33A8MVX0 844 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 SMPD2O60906 423 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 SEC22BO75396 215 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 SOD1P00441 154 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 PDYNP01213 254 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 BMP2P12643 396 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 GRIA3P42263 894 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 MTHFRP42898 656 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 CTSCP53634 463 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 C21orf58P58505 322 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 FOLH1Q04609 750 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 LRRC74AQ0VAA2 488 aa10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 CSTF3Q12996 717 aaKnown RBP10.22□□□□□ -0.77
APOBEC3D-201ENST00000216099 ANKRD39Q53RE8 183 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms