RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 HNMTP50135 292 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 CDKN2DP55273 166 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 COLGALT2Q8IYK4 626 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 OR10Q1Q8NGQ4 319 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 ANKRD49Q8WVL7 239 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 ACDQ96AP0 544 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 SLC45A3Q96JT2 553 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 TAS2R3Q9NYW6 316 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 DNMT3AQ9Y6K1 912 aaPredicted RBP11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 MAU2Q9Y6X3 613 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 KNL1Q8NG31 2342 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 MAGEB17A8MXT2 336 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 FGBP02675 491 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 RAB3BP20337 219 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 SLC6A4P31645 630 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 DSG2Q14126 1118 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 SPANXN4Q5MJ08 99 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 CFAP77Q6ZQR2 320 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 DNAJB7Q7Z6W7 309 aaPredicted RBP11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 ISCA2Q86U28 154 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 ZNF280BQ86YH2 543 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 CNIH3Q8TBE1 160 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 IPCEF1Q8WWN9 437 aaPredicted RBP11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 QRFPRQ96P65 431 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 ANKRD60Q9BZ19 345 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 PPA2Q9H2U2 334 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 IL37Q9NZH6 218 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 KCNN3Q9UGI6 736 aa11.76□□□□□ -0.53
TSPAN9-201ENST00000011898 A8MUA0 341 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 NEDD8-MDP1E9PL57 170 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 DFNA5O60443 496 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 ELFN1P0C7U0 828 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 SH3BP2P78314 561 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 LAPTM4AQ15012 233 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 ZBTB6Q15916 424 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 TSTQ16762 297 aaKnown RBP11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 SIGIRRQ6IA17 410 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 SLC39A5Q6ZMH5 540 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 MTSS1LQ765P7 747 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 OR5K1Q8NHB7 308 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 OLIG1Q8TAK6 271 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 IGSF8Q969P0 613 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 PLD4Q96BZ4 506 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 SCRN2Q96FV2 425 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 SCLYQ96I15 445 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 PSKH2Q96QS6 385 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 RAD18Q9NS91 495 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 ERVK-18Q9QC07 812 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 EVPLQ92817 2033 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 TNFRSF11BO00300 401 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 PER2O15055 1255 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 RPN2P04844 631 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 HOXC8P31273 242 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 ETV3P41162 512 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 CASP3P42574 277 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 ASMTP46597 345 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 ATP4BP51164 291 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 POU6F2P78424 691 aaPredicted RBP11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 FNDC3BQ53EP0 1204 aaKnown RBP11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 LRRC73Q5JTD7 316 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 TBC1D17Q9HA65 648 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 STOX2Q9P2F5 926 aaPredicted RBP11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 DHRS7Q9Y394 339 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 TP53P04637 393 aaPredicted RBP11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 NR2F1P10589 423 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 DSC3Q14574 896 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 CAPN13Q6MZZ7 669 aaPredicted RBP11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 CXXC5Q7LFL8 322 aaKnown RBP11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 RHEBL1Q8TAI7 183 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 GAL3ST3Q96A11 431 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 TIFAQ96CG3 184 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 SGTBQ96EQ0 304 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 PGAP3Q96FM1 320 aaPredicted RBP11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 HYLS1Q96M11 299 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 MMP28Q9H239 520 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 PIGUQ9H490 435 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 PCDHGB6Q9Y5F9 930 aa11.75□□□□□ -0.53
TSPAN9-201ENST00000011898 A0A1W2PQ67 120 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 LOC730098B7Z3J9 87 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 H7C0S8 307 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 STX16O14662 325 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 OR1I1O60431 355 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 CDC40O60508 579 aaKnown RBP eCLIP11.74□□□□□ -0.534e-6■□□□□ 9.9
TSPAN9-201ENST00000011898 MT-ND2P03891 347 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 KELP23276 732 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 LCN1P31025 176 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 RACK1P63244 317 aaKnown RBP11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 NFKB2Q00653 900 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 ZNF697Q5TEC3 545 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 NDUFAF5Q5TEU4 345 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 PIK3R6Q5UE93 754 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 ANKRD54Q6NXT1 300 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 SPATC1Q76KD6 591 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 DTX3Q8N9I9 347 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 SLC5A11Q8WWX8 675 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 KCNJ9Q92806 393 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 TCF25Q9BQ70 676 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 MROQ9BYG7 248 aa11.74□□□□□ -0.53
TSPAN9-201ENST00000011898 HCN2Q9UL51 889 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms