RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Ptger4P32240 513 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 GuloP58710 440 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ruvbl1P60122 456 aaKnown RBP18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Hpcal1P62748 193 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 ErfP70459 551 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 GiprQ0P543 460 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 InipQ3TXT3 104 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm10696Q3UTC4 357 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Nudcd1Q6PIP5 582 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 CcsapQ8QZT2 252 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr478Q8VG04 314 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr659Q8VGV6 322 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 SelenomQ8VHC3 145 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Dhrs7Q9CXR1 338 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 NtsQ9D3P9 169 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Dpp6Q9Z218 804 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 PpigA2AR02 752 aaKnown RBP18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Mup6A2AV72 179 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Rab23P35288 237 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Pou1f1Q00286 291 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Havcr1Q5QNS5 305 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Rbm45Q8BHN5 476 aaKnown RBP18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ly6g5cQ8K1T5 149 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ahi1Q8K3E5 1047 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr48Q8VGN4 301 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cts7Q91ZF2 331 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Tmem53Q9D0Z3 276 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Dpysl5Q9EQF6 564 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Dll4Q9JI71 686 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Trem1Q9JKE2 230 aa18.1■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ccdc163A2AGD7 326 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 MndalD0QMC3 538 aaKnown RBP18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm10608E9PZ13 166 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vmn2r115E9Q0E7 857 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Itga10E9Q6R1 1167 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm340F6RGI3 1242 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm5861F6VCN9 180 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 4933402N22RikF7D1B3 190 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm19965J3QNY8 723 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Rrm2P11157 390 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Acod1P54987 488 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Pin1rt1Q3ULQ2 159 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cdh12Q5RJH3 794 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Fzd4Q61088 537 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr1015Q7TR94 312 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr169Q7TS53 313 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 1700001K19RikQ80ZT1 219 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ostm1Q8BGT0 338 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Fbxl14Q8BID8 400 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 TrhdeQ8K093 1025 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 FgbQ8K0E8 481 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vps4aQ8VEJ9 437 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr722Q8VFC8 308 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr441Q8VFS5 310 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr1469Q8VFW5 309 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Tex47Q9D5W8 253 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 GraspQ9JJA9 392 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Vnn3Q9QZ25 500 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Oaz3Q9R109 243 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 PfkpQ9WUA3 784 aaKnown RBP18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Srd5a3Q9WUP4 330 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Tcf7l1Q9Z1J1 584 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Sult2a7A0A1B0GRF0 313 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Nlrp1bA1Z198 1177 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm6592A2AHC7 168 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm14147A2AQX6 640 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr742A2RTP5 311 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Xkr6E9Q6C8 638 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 AF366264G3X9P9 502 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 P01675 107 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 P01676 107 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 P01677 107 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 P01678 107 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Cma1P21844 247 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Pdss2Q33DR3 401 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Tmem184cQ3TPR7 525 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 WhammQ571B6 793 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Egfl8Q6GUQ1 293 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Ubp1Q811S7 540 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 GanabQ8BHN3 944 aaKnown RBP18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Steap3Q8CI59 488 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Spz1Q99MY0 378 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Olfr701Q9D3U9 316 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 AcoxlQ9DBS4 632 aa18.09■□□□□ 0.49
Shkbp1-201ENSMUST00000003857 Gm7682A0A0J9YUM1 481 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Vmn2r4K7N784 913 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Tulp3O88413 460 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Slc22a8O88909 537 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Fkbp14P59024 211 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Armc7Q3UJZ3 198 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Q3UY34 256 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Olfr1051Q7TR76 308 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Ppp1r15bQ8BFW3 697 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Elmo1Q8BPU7 727 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Cdkl1Q8CEQ0 352 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 GaleQ8R059 347 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 SdslQ8R238 329 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Vmn1r30Q8R2D2 302 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 Chst15Q91XQ5 561 aa18.08■□□□□ 0.48
Shkbp1-201ENSMUST00000003857 St3gal4Q91Y74 333 aa18.08■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms