RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CBSP35520 551 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 OR1E2P47887 323 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 LIMK1P53667 647 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 FOXD4Q12950 439 aaPredicted RBP10.53□□□□□ -0.72
SNIP1-204ENST00000638725 GPR33Q49SQ1 333 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 MLIPQ5VWP3 458 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 APCDD1Q8J025 514 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 C2orf69Q8N8R5 385 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 OR8J2Q8NGG1 315 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 HIST1H2AHQ96KK5 128 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 FCRL1Q96LA6 429 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 YME1L1Q96TA2 773 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 SDHCQ99643 169 aaPredicted RBP10.53□□□□□ -0.72
SNIP1-204ENST00000638725 HIST1H2AJQ99878 128 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 P2RY13Q9BPV8 354 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 H2AFJQ9BTM1 129 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 DOHHQ9BU89 302 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 DUSP26Q9BV47 211 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 SLC12A9Q9BXP2 914 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 EMILIN2Q9BXX0 1053 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 RAPGEFL1Q9UHV5 662 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 SNX8Q9Y5X2 465 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 PEX16Q9Y5Y5 336 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 NPIPB15A6NHN6 443 aaPredicted RBP10.53□□□□□ -0.72
SNIP1-204ENST00000638725 CTDSP2O14595 271 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 ADRA2AP08913 450 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 HLA-EP13747 358 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 GABRB1P18505 474 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 CDH12P55289 794 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 SPIBQ01892 262 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 RGNQ15493 299 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 ATP13A5Q4VNC0 1218 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 LRRC66Q68CR7 880 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 RGMBQ6NW40 437 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 NAGSQ8N159 534 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 TCAIMQ8N3R3 496 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 OR5M11Q96RB7 305 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 RAD9AQ99638 391 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 KCNS3Q9BQ31 491 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 CCM2Q9BSQ5 444 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 DNAJC11Q9NVH1 559 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 ERVK13-1Q9NX77 482 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 PADI2Q9Y2J8 665 aa10.53□□□□□ -0.72
SNIP1-204ENST00000638725 CA12O43570 354 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 PCDH7O60245 1069 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 KIAA0513O60268 411 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ABCB1P08183 1280 aaPredicted RBP10.52□□□□□ -0.73
SNIP1-204ENST00000638725 POU2F1P14859 743 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 JUPP14923 745 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 DEFA1P59665 94 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 DEFA3P59666 94 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 CDH18Q13634 790 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 DOC2BQ14184 412 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 NDUFA5Q16718 116 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 CYP27C1Q4G0S4 372 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 FBXO43Q4G163 708 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 CDKL4Q5MAI5 379 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 SPANXN2Q5MJ10 180 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 AGAP6Q5VW22 663 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 RAVER1Q8IY67 606 aaKnown RBP10.52□□□□□ -0.73
SNIP1-204ENST00000638725 LGI4Q8N135 537 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 OR9Q2Q8NGE9 314 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ALG14Q96F25 216 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 AGAP4Q96P64 663 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 COPS8Q99627 209 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 KLF16Q9BXK1 252 aaPredicted RBP10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ZDHHC3Q9NYG2 299 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 DUSP12Q9UNI6 340 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF106Q9H2Y7 1883 aaKnown RBP10.52□□□□□ -0.73
SNIP1-204ENST00000638725 C1orf226A1L170 272 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ADAMDEC1O15204 470 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ZW10O43264 779 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 HMGA1P17096 107 aaKnown RBP10.52□□□□□ -0.73
SNIP1-204ENST00000638725 PXNP49023 591 aaPredicted RBP10.52□□□□□ -0.73
SNIP1-204ENST00000638725 IRF8Q02556 426 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ACSM2AQ08AH3 577 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 IRF3Q14653 427 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 MED22Q15528 200 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 TSTQ16762 297 aaKnown RBP10.52□□□□□ -0.73
SNIP1-204ENST00000638725 EXOC3L2Q2M3D2 409 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ACSM2BQ68CK6 577 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ADNP2Q6IQ32 1131 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 TTC23LQ6PF05 361 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 TRAF7Q6Q0C0 670 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ANGPTL8Q6UXH0 198 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ZNF783Q6ZMS7 281 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 CCDC190Q86UF4 302 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 HOMEZQ8IX15 550 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 FBXO22Q8NEZ5 403 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 B3GNT7Q8NFL0 401 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 ASB11Q8WXH4 323 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 CEP44Q9C0F1 390 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 MS4A12Q9NXJ0 267 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 TRPM5Q9NZQ8 1165 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 VPS29Q9UBQ0 182 aa10.52□□□□□ -0.73
SNIP1-204ENST00000638725 CFAP20Q9Y6A4 193 aaKnown RBP10.52□□□□□ -0.73
SNIP1-204ENST00000638725 PRAMEF25A6NGN4 478 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 GLTPD2A6NH11 291 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 GABRR3A8MPY1 467 aa10.51□□□□□ -0.73
SNIP1-204ENST00000638725 AGAP14A8MT82 685 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms