RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 LINC00052Q96N35 136 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 KCNJ15Q99712 375 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 MRPL45Q9BRJ2 306 aaKnown RBP11.62□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF70Q9UC06 446 aaPredicted RBP11.62□□□□□ -0.55
CAPN3-221ENST00000638141 BAIAP2Q9UQB8 552 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 KCNK7Q9Y2U2 307 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 C7orf66A4D0T2 115 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 SH3D21A4FU49 640 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 INMT-MINDY4F8WBC2 141 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 M0QYT0 321 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 KLK8O60259 260 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 CCNDBP1O95273 360 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 AKT1P31749 480 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 RPL9P32969 192 aaKnown RBP11.62□□□□□ -0.55
CAPN3-221ENST00000638141 CDKN2DP55273 166 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 ITGA1P56199 1179 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 PFKFB4Q16877 469 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 SLC10A6Q3KNW5 377 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 FLYWCH1Q4VC44 716 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF789Q5FWF6 425 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 TRIQKQ629K1 86 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 RANBP10Q6VN20 620 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 MSRB3Q8IXL7 192 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 FBXO39Q8N4B4 442 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 LRRC17Q8N6Y2 441 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 ATG16L2Q8NAA4 619 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 NETO1Q8TDF5 533 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 KCTD13Q8WZ19 329 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 KIAA1191Q96A73 305 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 ZBED6CLQ96FA7 236 aaPredicted RBP11.62□□□□□ -0.55
CAPN3-221ENST00000638141 DIRAS2Q96HU8 199 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 C12orf57Q99622 126 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 EPYCQ99645 322 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 IKZF5Q9H5V7 419 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 GALNT9Q9HCQ5 603 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 ABCB9Q9NP78 766 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 ABCG2Q9UNQ0 655 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 CDH10Q9Y6N8 788 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 RALGAPA2Q2PPJ7 1873 aa11.62□□□□□ -0.55
CAPN3-221ENST00000638141 PQLC2LA1A4F0 135 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 HYKKA2RU49 373 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 A8MXK9 166 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 BTN3A1O00481 513 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 S1PR4O95977 384 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 PIPP12273 146 aaPredicted RBP11.61□□□□□ -0.55
CAPN3-221ENST00000638141 PTPRAP18433 802 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 EPHA4P54764 986 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 TP53BP2Q13625 1128 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 GTF2H3Q13889 308 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 TUSC1Q2TAM9 212 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 PYDC2Q56P42 97 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF628Q5EBL2 1059 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 SYPL2Q5VXT5 272 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 EIF3MQ7L2H7 374 aaKnown RBP11.61□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF605Q86T29 641 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 TIGD4Q8IY51 512 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 C7orf31Q8N865 590 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 SLAIN1Q8ND83 568 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 IPMKQ8NFU5 416 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 OR56A4Q8NGH8 313 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 STAG3L4Q8TBR4 150 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 SLC9A6Q92581 669 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 UCN3Q969E3 161 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 NXPE3Q969Y0 559 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 FAM129BQ96TA1 746 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 SLC19A3Q9BZV2 496 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 ELOVL6Q9H5J4 265 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 HHATLQ9HCP6 504 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 HPF1Q9NWY4 346 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 SDHAF2Q9NX18 166 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 GPR83Q9NYM4 423 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 UBP1Q9NZI7 540 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 FBXW11Q9UKB1 542 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 ASB4Q9Y574 426 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 A0A0A6YYJ9 748 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 F8W810 466 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 INPPL1O15357 1258 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 HMBSP08397 361 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 HSMCR30P0CW71 290 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 ANXA3P12429 323 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 CKMT1AP12532 417 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 CRISP3P54108 245 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 YWHAHQ04917 246 aaPredicted RBP11.61□□□□□ -0.55
CAPN3-221ENST00000638141 ZNF91Q05481 1191 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 LTB4RQ15722 352 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 KLHL22Q53GT1 634 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 TMEM151BQ8IW70 566 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 SLC22A8Q8TCC7 542 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 NPAS1Q99742 590 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 MED18Q9BUE0 208 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 CNPPD1Q9BV87 410 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 DERL2Q9GZP9 239 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 SIK2Q9H0K1 926 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 PPP1R3EQ9H7J1 279 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 RGS18Q9NS28 235 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 SLC25A37Q9NYZ2 338 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 KCMF1Q9P0J7 381 aa11.61□□□□□ -0.55
CAPN3-221ENST00000638141 NDRG2Q9UN36 371 aaKnown RBP11.61□□□□□ -0.55
CAPN3-221ENST00000638141 MRPS7Q9Y2R9 242 aaKnown RBP11.61□□□□□ -0.55
CAPN3-221ENST00000638141 SAMHD1Q9Y3Z3 626 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms