RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 BRINP1O60477 761 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 NPHS1O60500 1241 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 TIAF1O95411 115 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 GSTM2P28161 218 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 RCN2Q14257 317 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 GRM7Q14831 915 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 GGTA1PQ4G0N0 100 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 TLDC1Q6P9B6 456 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 SYVN1Q86TM6 617 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 ASPGQ86U10 573 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 TMEM126BQ8IUX1 230 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 LAS2Q8IYD9 372 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 ZNF655Q8N720 491 aaPredicted RBP15.27■□□□□ 0.04
CLN6-216ENST00000636876 CAMKVQ8NCB2 501 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 TRPV3Q8NET8 790 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 OR7G3Q8NG95 312 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 PPP1R14CQ8TAE6 165 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 MDM1Q8TC05 714 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 AGAP11Q8TF27 550 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 SLC13A3Q8WWT9 602 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 TM4SF19Q96DZ7 209 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 SEC16BQ96JE7 1060 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 CNDP1Q96KN2 507 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 MAGEB10Q96LZ2 347 aaPredicted RBP15.27■□□□□ 0.04
CLN6-216ENST00000636876 RHBGQ9H310 441 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 STARD5Q9NSY2 213 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 FOXJ2Q9P0K8 574 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 TRPS1Q9UHF7 1281 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 ZNF225Q9UK10 706 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 PCDHB3Q9Y5E6 796 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 PCDHGA11Q9Y5H2 935 aa15.27■□□□□ 0.04
CLN6-216ENST00000636876 FREM2Q5SZK8 3169 aa15.27■□□□□ 0.03
CLN6-216ENST00000636876 H0YIV9 168 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 H3BQF6 201 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 UBFD1O14562 309 aaKnown RBP15.26■□□□□ 0.03
CLN6-216ENST00000636876 ZNF749O43361 778 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 SCRG1O75711 98 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 OR4F21O95013 312 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 ESRRBO95718 433 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 STATHP02808 62 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 SERPINE1P05121 402 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 NR1D1P20393 614 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 BGNP21810 368 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 SLC5A2P31639 672 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 SERPINB5P36952 375 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 GCGRP47871 477 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 CYP4F2P78329 520 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 GPS2Q13227 327 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 ZRSR2Q15696 482 aaKnown RBP15.26■□□□□ 0.03
CLN6-216ENST00000636876 CHI3L2Q15782 390 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 CPSF6Q16630 551 aaKnown RBP eCLIP15.26■□□□□ 0.03
CLN6-216ENST00000636876 HKDC1Q2TB90 917 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 PRAMEF17Q5VTA0 474 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 VN1R5Q7Z5H4 357 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 TTC29Q8NA56 475 aaPredicted RBP15.26■□□□□ 0.03
CLN6-216ENST00000636876 NLNQ9BYT8 704 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 SLC29A3Q9BZD2 475 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 MID1IP1Q9NPA3 183 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 THSD1Q9NS62 852 aa15.26■□□□□ 0.03
CLN6-216ENST00000636876 ANKDD1BA6NHY2 528 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 FFAR3O14843 346 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 GPR42O15529 346 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 NDUFS4O43181 175 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 STK17BO94768 372 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 KIAA0754O94854 1291 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 SERPIND1P05546 499 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 ENO1P06733 434 aaKnown RBP15.25■□□□□ 0.03
CLN6-216ENST00000636876 SLC35G6P0C7Q6 338 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 PCNAP12004 261 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 NEFHP12036 1026 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 ZNF28P17035 718 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 SERPINB1P30740 379 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 EMP3P54852 163 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 PWP1Q13610 501 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 YOD1Q5VVQ6 348 aaPredicted RBP15.25■□□□□ 0.03
CLN6-216ENST00000636876 CES4AQ5XG92 561 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 ADNP2Q6IQ32 1131 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 ARHGEF39Q8N4T4 335 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 CDYL2Q8N8U2 506 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 NT5CQ8TCD5 201 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 CREB3L4Q8TEY5 395 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 REPS1Q96D71 796 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 RNF31Q96EP0 1072 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 MACROD1Q9BQ69 325 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 NDC1Q9BTX1 674 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 ULBP3Q9BZM4 244 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 ACTR5Q9H9F9 607 aaPredicted RBP15.25■□□□□ 0.03
CLN6-216ENST00000636876 SRPK3Q9UPE1 567 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 RUVBL1Q9Y265 456 aaKnown RBP15.25■□□□□ 0.03
CLN6-216ENST00000636876 TSC22D4Q9Y3Q8 395 aa15.25■□□□□ 0.03
CLN6-216ENST00000636876 HYKKA2RU49 373 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 CPNE3O75131 537 aaKnown RBP15.24■□□□□ 0.03
CLN6-216ENST00000636876 CLEC3AO75596 197 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 NTRK1P04629 796 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 CHRNGP07510 517 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 SERPINA6P08185 405 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 HBQ1P09105 142 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 CHN1P15882 459 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 GRK2P25098 689 aa15.24■□□□□ 0.03
CLN6-216ENST00000636876 CD82P27701 267 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms