RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ATP1B2P14415 290 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 ABOP16442 354 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 SLC5A9Q2M3M2 681 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 ERI1Q8IV48 349 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 MINDY2Q8NBR6 621 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 OR13C3Q8NGS6 347 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 SUCNR1Q9BXA5 334 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 POFUT2Q9Y2G5 429 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 OR1E2P47887 323 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 MRPL49Q13405 166 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 PAQR7Q86WK9 346 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 TMEM17Q86X19 198 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 PHF13Q86YI8 300 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 MARCH9Q86YJ5 346 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 C1orf127Q8N9H9 656 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 SDSLQ96GA7 329 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 ZC3H10Q96K80 434 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 PTGES2Q9H7Z7 377 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 SAR1AQ9NR31 198 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 CALML5Q9NZT1 146 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 ALG5Q9Y673 324 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 A8MV72 311 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 SLC9A3P48764 834 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 EGFLAMQ63HQ2 1017 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 ZNF355PQ9NSJ1 428 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 TVP23AA6NH52 213 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 ZNF670-ZNF695F2Z2N8 137 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 MATN3O15232 486 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 RALGPS1Q5JS13 557 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 TSTD2Q5T7W7 516 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 ZYG11AQ6WRX3 759 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 CCDC116Q8IYX3 515 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 HHIPQ96QV1 700 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 LRRC4CQ9HCJ2 640 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 PXDNQ92626 1479 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 GGT3PA6NGU5 568 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 SIX3O95343 332 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 ERCC1P07992 297 aaPredicted RBP17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 POU3F4P49335 361 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 DSTNP60981 165 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 KLHL36Q8N4N3 616 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 LRRC52Q8N7C0 313 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 RCBTB1Q8NDN9 531 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 WDR20Q8TBZ3 569 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 ACAD8Q9UKU7 415 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 EDDM13A0A1B0GTR0 161 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 RPS14P62263 151 aaKnown RBP17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 SLC1A5Q15758 541 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 IL1RAPQ9NPH3 570 aa17.32■□□□□ 0.36
CACNA1A-227ENST00000636549 CCNE2O96020 404 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 GSTT2BP0CG30 244 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 SIRPB2Q5JXA9 342 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 CNKSR3Q6P9H4 555 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 OR4N5Q8IXE1 308 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 OR14L1PQ8NHC6 308 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 POLR2J2Q9GZM3 115 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 P2RX2Q9UBL9 471 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 SOWAHBA6NEL2 793 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 GGT2P36268 569 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 GNAZP19086 355 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 RAB28P51157 221 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 DGKQP52824 942 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 RTKNQ9BST9 563 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 ZFR2Q9UPR6 939 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 BPGMP07738 259 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 GNAO1P09471 354 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 RAB4AP20338 218 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 UBE2NP61088 152 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 FCRLBQ6BAA4 426 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 ELMOD2Q8IZ81 293 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 CBR4Q8N4T8 237 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 SLC13A3Q8WWT9 602 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 RAB8BQ92930 207 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 KREMEN1Q96MU8 473 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 PELOQ9BRX2 385 aaKnown RBP17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 Q9N2J8 555 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 PRTFDC1Q9NRG1 225 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 MADDQ8WXG6 1647 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 ATE1O95260 518 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 XRCC1P18887 633 aaPredicted RBP17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 FAPQ12884 760 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 QPCTQ16769 361 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 PRR22Q8IZ63 422 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 OR4D6Q8NGJ1 314 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 ACBD6Q9BR61 282 aa17.31■□□□□ 0.36
CACNA1A-227ENST00000636549 LEFTY2O00292 366 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 SOCS2O14508 198 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 ITGA10O75578 1167 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 HLA-DQB2P05538 268 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 TACSTD2P09758 323 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 OR4D2P58180 307 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 CEACAM20Q6UY09 585 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 TRAV6A0A075B6T7 132 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 FBP2O00757 339 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 SFTPDP35247 375 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 LRIT3Q3SXY7 679 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 FLYWCH1Q4VC44 716 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 AADACL4Q5VUY2 407 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 FSTL4Q6MZW2 842 aa17.3■□□□□ 0.36
CACNA1A-227ENST00000636549 ZNF550Q7Z398 422 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms