RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 TNFRSF8P28908 595 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 CSKP41240 450 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 RPS21P63220 83 aaKnown RBP5.4□□□□□ -1.55
SCN1A-209ENST00000635750 DSC2Q02487 901 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 PMS2P3Q13401 168 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 MBLAC2Q68D91 279 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 TOMM5Q8N4H5 51 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 FAM47BQ8NA70 645 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 WDR18Q9BV38 432 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 MAF1Q9H063 256 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 DPAGT1Q9H3H5 408 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 FBRSL1Q9HCM7 1045 aaKnown RBP5.4□□□□□ -1.55
SCN1A-209ENST00000635750 GNG13Q9P2W3 67 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 VPS29Q9UBQ0 182 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 TCAF1Q9Y4C2 921 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 INPPL1O15357 1258 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 TGM5O43548 720 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 ATE1O95260 518 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 ADRA1BP35368 520 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 PTDSS1P48651 473 aaKnown RBP5.4□□□□□ -1.55
SCN1A-209ENST00000635750 RGS6P49758 472 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 NT5DC1Q5TFE4 455 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 TCEANCQ8N8B7 351 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 OR56B2PQ8NGI1 322 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 DAZLQ92904 295 aaKnown RBP5.4□□□□□ -1.55
SCN1A-209ENST00000635750 ACTR6Q9GZN1 396 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 SLC22A4Q9H015 551 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF358Q9NW07 568 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 HAO2Q9NYQ3 351 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 FLRT1Q9NZU1 646 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 PCDHGC4Q9Y5F7 938 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 OR5H15A6NDH6 313 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 OR5H14A6NHG9 310 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 OR5H1A6NKK0 313 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 KLK1P06870 262 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 MAGP20916 626 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 PRPS1L1P21108 318 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 VIPR1P32241 457 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 HNRNPKP61978 463 aaKnown RBP eCLIP5.4□□□□□ -1.55
SCN1A-209ENST00000635750 RPS14P62263 151 aaKnown RBP5.4□□□□□ -1.55
SCN1A-209ENST00000635750 MADCAM1Q13477 382 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 NTRK2Q16620 822 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 KIAA0907Q7Z7F0 614 aaPredicted RBP5.4□□□□□ -1.55
SCN1A-209ENST00000635750 CIR1Q86X95 450 aaPredicted RBP5.4□□□□□ -1.55
SCN1A-209ENST00000635750 CNTD1Q8N815 330 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 OR5J2Q8NH18 312 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 GLYATL1Q969I3 302 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 NXNL1Q96CM4 212 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 FEM1AQ9BSK4 669 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 TAS2R1Q9NYW7 299 aa5.4□□□□□ -1.55
SCN1A-209ENST00000635750 B4GALT4O60513 344 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CTDNEP1O95476 244 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 OR4Q2P0C623 313 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TYRP1P17643 537 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 OTX2P32243 289 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 RBMXP38159 391 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 NRIP1P48552 1158 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TPTEP56180 551 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 GANABQ14697 944 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PLEKHG6Q3KR16 790 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 FAM174BQ3ZCQ3 159 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 GPR33Q49SQ1 333 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ARSHQ5FYA8 562 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 C6orf141Q5SZD1 244 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 DPY19L4Q7Z388 723 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 RABEPKQ7Z6M1 372 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 OR13C3Q8NGS6 347 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 NDNFQ8TB73 568 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ASB15Q8WXK1 588 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 EFCAB11Q9BUY7 163 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TMED9Q9BVK6 235 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 MEAF6Q9HAF1 191 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 KCNK13Q9HB14 408 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 CDH20Q9HBT6 801 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PAK1IP1Q9NWT1 392 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 SDHAF2Q9NX18 166 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ACSL5Q9ULC5 683 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 GPR34Q9UPC5 381 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 TCRBV9S1A1TA0A576 114 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 GKN3PP0CG01 181 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 KCNC1P48547 511 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 RTP1P59025 263 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 BLMHQ13867 455 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ABHD17BQ5VST6 288 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ALYREFQ86V81 257 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 SLC15A3Q8IY34 581 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PQLC1Q8N2U9 271 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 C9orf43Q8TAL5 461 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PPP1R35Q8TAP8 253 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 BPIFB1Q8TDL5 484 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 FCAMRQ8WWV6 532 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 MOAP1Q96BY2 351 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 LRRC19Q9H756 370 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 ZNF701Q9NV72 531 aaPredicted RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 REV1Q9UBZ9 1251 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 MYH13Q9UKX3 1938 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 PIP5K1CO60331 668 aa5.39□□□□□ -1.55
SCN1A-209ENST00000635750 H1F0P07305 194 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 RPS2P15880 293 aaKnown RBP5.39□□□□□ -1.55
SCN1A-209ENST00000635750 GCH1P30793 250 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms